Gene
RNA
| Item | Value |
|---|---|
| gene id | G117431 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16460943 ~ 16462505 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135114 | False | 275 | lncRNA | 0.36 | 2 | 16460943 | 16462420 |
| TU135115 | True | 307 | lncRNA | 0.37 | 2 | 16460943 | 16462505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536191 | LOC106605933 | coding | downstream | 13437 | 16323418 ~ 16447506 (-) |
| LOC118937848 | NA | coding | downstream | 27498 | 16430783 ~ 16433481 (-) |
| LOC110536161 | LOC106593005 | coding | downstream | 171763 | 16249431 ~ 16289180 (-) |
| LOC110536166 | NA | coding | downstream | 213524 | 16245769 ~ 16247419 (-) |
| LOC110536154 | LOC106575541 | coding | downstream | 215387 | 16217471 ~ 16245556 (-) |
| LOC118937856 | NA | coding | upstream | 80979 | 16543484 ~ 16544221 (-) |
| LOC118937862 | NA | coding | upstream | 82137 | 16544642 ~ 16545379 (-) |
| LOC110536202 | LOC105024462 | coding | upstream | 373114 | 16835619 ~ 16870366 (-) |
| LOC110519673 | LOC106605887 | coding | upstream | 610713 | 17073218 ~ 17141568 (-) |
| LOC110534246 | LOC106605885 | coding | upstream | 631742 | 17094247 ~ 17121323 (-) |
| G117427 | NA | non-coding | downstream | 6496 | 16454216 ~ 16454447 (-) |
| G117407 | NA | non-coding | downstream | 46238 | 16413718 ~ 16414705 (-) |
| G117362 | NA | non-coding | downstream | 159097 | 16301548 ~ 16301846 (-) |
| G117335 | LOC100286671 | non-coding | downstream | 162398 | 16291830 ~ 16298545 (-) |
| G117471 | NA | non-coding | upstream | 75974 | 16538479 ~ 16547809 (-) |
| G117508 | NA | non-coding | upstream | 177328 | 16639833 ~ 16649331 (-) |
| G117511 | NA | non-coding | upstream | 180387 | 16642892 ~ 16644473 (-) |
| G117517 | NA | non-coding | upstream | 202413 | 16664918 ~ 16665786 (-) |
| G117481 | NA | non-coding | upstream | 204382 | 16666887 ~ 16694358 (-) |
| LOC110536122 | LOC106573839 | other | downstream | 255526 | 16203014 ~ 16208363 (-) |
| LOC110536103 | s10ag | other | downstream | 265326 | 16189940 ~ 16195762 (-) |
| LOC110534219 | LOC106575505 | other | downstream | 352967 | 16079813 ~ 16108032 (-) |
| LOC110518702 | atp8b2 | other | downstream | 500941 | 15898225 ~ 15982097 (-) |
| LOC110536013 | NA | other | downstream | 603239 | 15778980 ~ 15857764 (-) |
| G118273 | NA | other | upstream | 365166 | 16827671 ~ 16828022 (-) |
| G118303 | NA | other | upstream | 471064 | 16933569 ~ 16934290 (-) |
| G118319 | NA | other | upstream | 533015 | 16916621 ~ 16998362 (-) |
| G118392 | NA | other | upstream | 588676 | 17051181 ~ 17055124 (-) |
