G117247


Basic Information

Item Value
gene id G117247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16644201 ~ 16644911 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU134875
ATTACAGATTAGGAAacagctacctctactgttcagccacctgtcttcctcattcctcctcctttaacattacagattaggagacagctacctctactgttcagcctcctgtcttcctcattcctcctcctataacattacaggttaggagacagctacctctactgtCCAGCCTCCTGtattcctcattcctcctcctataacattacagattaggagacagcCTCTTCTAcctgttcagcctcctgtcttcctcattcctcctcctttAACATTACAGActaggagacagctacctctactgttcagtctcctgtcttcctcattcctcctcctagaACATTACAGACTAGGAGGcagctacctctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134875 True 370 lncRNA 0.48 2 16644201 16644911

Neighbor

gene id symbol gene type direction distance location
LOC110536177 LOC100286671 coding upstream 345652 16290145 ~ 16298549 (+)
chrnb2 LOC106575520 coding upstream 471163 16133770 ~ 16173038 (+)
LOC110536089 LOC106575512 coding upstream 526642 16108811 ~ 16117559 (+)
LOC110536080 LOC106575458 coding upstream 608212 16023748 ~ 16035989 (+)
LOC118937786 NA coding upstream 817671 15820843 ~ 15826530 (+)
LOC118936591 LOC106574320 coding downstream 88422 16733333 ~ 16747286 (+)
LOC110520867 LOC106606111 coding downstream 114825 16759736 ~ 16767223 (+)
LOC110536210 LOC106574226 coding downstream 226631 16871542 ~ 16875899 (+)
LOC110536226 kcp2 coding downstream 231083 16875994 ~ 16879352 (+)
LOC110536234 LOC106575974 coding downstream 244667 16889578 ~ 16891184 (+)
G117210 NA non-coding upstream 87779 16555747 ~ 16556422 (+)
G117187 NA non-coding upstream 134596 16509118 ~ 16509605 (+)
G117163 NA non-coding upstream 181269 16460998 ~ 16462932 (+)
G117149 NA non-coding upstream 203458 16439176 ~ 16440743 (+)
G117145 NA non-coding upstream 226921 16411417 ~ 16417280 (+)
G117250 NA non-coding downstream 3959 16648870 ~ 16651426 (+)
G117251 NA non-coding downstream 9853 16654764 ~ 16656434 (+)
G117254 NA non-coding downstream 16355 16661266 ~ 16663706 (+)
G117320 NA non-coding downstream 143589 16788500 ~ 16798757 (+)
G117048 NA other upstream 458417 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1192513 15448845 ~ 15451856 (+)
LOC110535783 LOC106606004 other upstream 1277412 15355848 ~ 15368210 (+)
G116224 NA other upstream 1306499 15337430 ~ 15337702 (+)
LOC110535811 acbd7 other upstream 1307843 15329572 ~ 15336358 (+)
LOC110536275 s10i other downstream 350799 16995630 ~ 16998361 (+)
G117704 NA other downstream 405221 17050132 ~ 17050839 (+)
G117714 LOC106605886 other downstream 428290 17073201 ~ 17073701 (+)
LOC110520798 fam189b other downstream 755102 17395343 ~ 17421816 (+)
G117735 NA other downstream 810854 17455765 ~ 17458022 (+)

Expression


Co-expression Network