Gene
RNA
| Item | Value |
|---|---|
| gene id | G117254 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16661266 ~ 16663706 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106576493 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU134885 | True | 965 | lncRNA | 0.47 | 6 | 16661266 | 16663706 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536177 | LOC100286671 | coding | upstream | 362717 | 16290145 ~ 16298549 (+) |
| chrnb2 | LOC106575520 | coding | upstream | 488228 | 16133770 ~ 16173038 (+) |
| LOC110536089 | LOC106575512 | coding | upstream | 543707 | 16108811 ~ 16117559 (+) |
| LOC110536080 | LOC106575458 | coding | upstream | 625277 | 16023748 ~ 16035989 (+) |
| LOC118937786 | NA | coding | upstream | 834736 | 15820843 ~ 15826530 (+) |
| LOC118936591 | LOC106574320 | coding | downstream | 69627 | 16733333 ~ 16747286 (+) |
| LOC110520867 | LOC106606111 | coding | downstream | 96030 | 16759736 ~ 16767223 (+) |
| LOC110536210 | LOC106574226 | coding | downstream | 207836 | 16871542 ~ 16875899 (+) |
| LOC110536226 | kcp2 | coding | downstream | 212288 | 16875994 ~ 16879352 (+) |
| LOC110536234 | LOC106575974 | coding | downstream | 225872 | 16889578 ~ 16891184 (+) |
| G117251 | NA | non-coding | upstream | 4832 | 16654764 ~ 16656434 (+) |
| G117250 | NA | non-coding | upstream | 9840 | 16648870 ~ 16651426 (+) |
| G117247 | NA | non-coding | upstream | 16355 | 16644201 ~ 16644911 (+) |
| G117210 | NA | non-coding | upstream | 104844 | 16555747 ~ 16556422 (+) |
| G117187 | NA | non-coding | upstream | 151661 | 16509118 ~ 16509605 (+) |
| G117320 | NA | non-coding | downstream | 124794 | 16788500 ~ 16798757 (+) |
| G117322 | NA | non-coding | downstream | 125895 | 16789601 ~ 16800145 (+) |
| G117591 | NA | non-coding | downstream | 145455 | 16809161 ~ 16809372 (+) |
| G117594 | NA | non-coding | downstream | 153292 | 16816998 ~ 16817255 (+) |
| G117048 | NA | other | upstream | 475482 | 16182890 ~ 16185784 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 1209578 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 1294477 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 1323564 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 1324908 | 15329572 ~ 15336358 (+) |
| LOC110536275 | s10i | other | downstream | 332004 | 16995630 ~ 16998361 (+) |
| G117704 | NA | other | downstream | 386426 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 409495 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 736307 | 17395343 ~ 17421816 (+) |
| G117735 | NA | other | downstream | 792059 | 17455765 ~ 17458022 (+) |
