G117579



Basic Information


Item Value
gene id G117579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16782879 ~ 16783579 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU135297
GGACAGGGGCCTTAATAGTCTAGACTATACATCTGTTGTTGTTAGTAGACTACAGGTGGTCAGACGGACAGGGGCCTTAATAGTCTAGACTATACATCTGTTGTTGTTAGTAGACTACAGGTGGTCAGAGGGACAGGGGCCTTAATAGTCTAGACTATACATCTGTTGTTGTTAGTAGACTACAGGTGGTCAGAGGGACAGGGGCCTTAATAGTCTAGACTATACATCTGTTGTTGTTAGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU135297 True 241 lncRNA 0.44 2 16782879 16783579

Neighbor


gene id symbol gene type direction distance location
LOC118937862 NA coding downstream 237500 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 238658 16543484 ~ 16544221 (-)
LOC110536191 LOC106605933 coding downstream 335373 16323418 ~ 16447506 (-)
LOC118937848 NA coding downstream 349434 16430783 ~ 16433481 (-)
LOC110536161 LOC106593005 coding downstream 493699 16249431 ~ 16289180 (-)
LOC110536202 LOC105024462 coding upstream 52040 16835619 ~ 16870366 (-)
LOC110519673 LOC106605887 coding upstream 289639 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding upstream 310668 17094247 ~ 17121323 (-)
LOC110520880 LOC106605923 coding upstream 594433 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 597240 17380819 ~ 17380955 (-)
G117533 NA non-coding downstream 24052 16695164 ~ 16758827 (-)
G117522 NA non-coding downstream 35868 16745040 ~ 16747011 (-)
G117481 NA non-coding downstream 88521 16666887 ~ 16694358 (-)
G117518 NA non-coding downstream 112327 16669900 ~ 16670552 (-)
G117517 NA non-coding downstream 117093 16664918 ~ 16665786 (-)
G117588 NA non-coding upstream 23124 16806703 ~ 16807057 (-)
G118266 NA non-coding upstream 32593 16816172 ~ 16816384 (-)
G118272 NA non-coding upstream 37614 16821193 ~ 16821394 (-)
G118265 NA non-coding upstream 37819 16821398 ~ 16821688 (-)
G118276 NA non-coding upstream 46263 16829842 ~ 16834995 (-)
LOC110536122 LOC106573839 other downstream 577462 16203014 ~ 16208363 (-)
LOC110536103 s10ag other downstream 587262 16189940 ~ 16195762 (-)
LOC110534219 LOC106575505 other downstream 674903 16079813 ~ 16108032 (-)
LOC110518702 atp8b2 other downstream 822877 15898225 ~ 15982097 (-)
LOC110536013 NA other downstream 925175 15778980 ~ 15857764 (-)
G118273 NA other upstream 44092 16827671 ~ 16828022 (-)
G118303 NA other upstream 149990 16933569 ~ 16934290 (-)
G118319 NA other upstream 211941 16916621 ~ 16998362 (-)
G118392 NA other upstream 267602 17051181 ~ 17055124 (-)

Expression



Co-expression Network