Gene
RNA
| Item | Value |
|---|---|
| gene id | G117608 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16843365 ~ 16849254 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135329 | True | 529 | lncRNA | 0.49 | 2 | 16843365 | 16849254 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520867 | LOC106606111 | coding | upstream | 76142 | 16759736 ~ 16767223 (+) |
| LOC118936591 | LOC106574320 | coding | upstream | 96079 | 16733333 ~ 16747286 (+) |
| LOC110512627 | efna3 | coding | upstream | 175937 | 16516081 ~ 16667428 (+) |
| LOC110536177 | LOC100286671 | coding | upstream | 544816 | 16290145 ~ 16298549 (+) |
| chrnb2 | LOC106575520 | coding | upstream | 670327 | 16133770 ~ 16173038 (+) |
| LOC110536210 | LOC106574226 | coding | downstream | 22288 | 16871542 ~ 16875899 (+) |
| LOC110536226 | kcp2 | coding | downstream | 26740 | 16875994 ~ 16879352 (+) |
| LOC110536234 | LOC106575974 | coding | downstream | 40324 | 16889578 ~ 16891184 (+) |
| LOC110534232 | LOC106575974 | coding | downstream | 47046 | 16896300 ~ 16897824 (+) |
| LOC118936967 | LOC106606015 | coding | downstream | 63596 | 16912850 ~ 16917506 (+) |
| G117602 | NA | non-coding | upstream | 13954 | 16829057 ~ 16829411 (+) |
| G117597 | NA | non-coding | upstream | 23082 | 16820044 ~ 16820283 (+) |
| G117595 | NA | non-coding | upstream | 25713 | 16817356 ~ 16817652 (+) |
| G117594 | NA | non-coding | upstream | 26110 | 16816998 ~ 16817255 (+) |
| G117591 | NA | non-coding | upstream | 33993 | 16809161 ~ 16809372 (+) |
| G117632 | NA | non-coding | downstream | 37773 | 16887027 ~ 16893997 (+) |
| G117636 | NA | non-coding | downstream | 52025 | 16901279 ~ 16901489 (+) |
| G117638 | NA | non-coding | downstream | 53648 | 16902902 ~ 16903245 (+) |
| LOC110536287 | LOC106605892 | non-coding | downstream | 177624 | 17026878 ~ 17055189 (+) |
| G117048 | NA | other | upstream | 657581 | 16182890 ~ 16185784 (+) |
| LOC110535842 | LOC106605985 | other | upstream | 1391677 | 15448845 ~ 15451856 (+) |
| LOC110535783 | LOC106606004 | other | upstream | 1476576 | 15355848 ~ 15368210 (+) |
| G116224 | NA | other | upstream | 1505663 | 15337430 ~ 15337702 (+) |
| LOC110535811 | acbd7 | other | upstream | 1507007 | 15329572 ~ 15336358 (+) |
| LOC110536275 | s10i | other | downstream | 146456 | 16995630 ~ 16998361 (+) |
| G117704 | NA | other | downstream | 200878 | 17050132 ~ 17050839 (+) |
| G117714 | LOC106605886 | other | downstream | 223947 | 17073201 ~ 17073701 (+) |
| LOC110520798 | fam189b | other | downstream | 550759 | 17395343 ~ 17421816 (+) |
| G117735 | NA | other | downstream | 606511 | 17455765 ~ 17458022 (+) |
