G118304 (LOC106575974)


Basic Information

Item Value
gene id G118304
gene name LOC106575974
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16890389 ~ 16897923 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136240
GTCAATACTGAACTAGGAAGAAGTGACTGGCACTGTCTATTCTGTTTTACACTTACAGGCCAAATACAAGACACACATCAGACAAATGTGACaaacagagagagtgggaaagcCACTGTTTATTCACAACAGTAAGACTTTTATAAAATGACTTATTTGACATATAGAAAAGCAAAATGACATATAGAAAACATCCATCTCTGCTTCTCTTTCTCCTTGTCCTGTCCTCCCTCACTTCTTGGCAGAAGCCTTCTGGGTGTGGAGCTGGTAGAGCTGTTCACAGGCAATGGAGAGGCCCACCACCAGAGAGACAAACTCCTCAAAGTTCACCTTCCCATCACCATTCTGGTCCAGATCCTTCATGATCGTGTCTATGGCGGCTGGGTCCTTCTGGgaCTTCAGGAAGCTGGCCAGTTCTGTCTTCATCAGCTCTTTGAGCTCCTTCTTGCTCAGTGTGTTGCCATCACCATCCTTTTCAGAATAGAGATGGAACACCATGATCAGGGACTCCATGGAACGCTCCAGCTCAGATGGCATGGCTGCAGATATTGACAcactgaggaggggagagagacgtCATTTAGGGTGGGTGTACTACTGTAGTCCCTGTATCTAAATACACTTACACACTGGAGATCCTGCAACAGCCAGGCTGCTGGTTCAAACCCAACTCAGGCCAGTTCCATTAAAT

Function

NR:

description
protein S100-A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136240 True 691 lncRNA 0.46 3 16890389 16897923

Neighbor

gene id symbol gene type direction distance location
LOC110536202 LOC105024462 coding downstream 20023 16835619 ~ 16870366 (-)
LOC118937862 NA coding downstream 345010 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 346168 16543484 ~ 16544221 (-)
LOC110536191 LOC106605933 coding downstream 442883 16323418 ~ 16447506 (-)
LOC110519673 LOC106605887 coding upstream 175295 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding upstream 196324 17094247 ~ 17121323 (-)
LOC110520880 LOC106605923 coding upstream 480089 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 482896 17380819 ~ 17380955 (-)
LOC118944170 NA coding upstream 483330 17381253 ~ 17381388 (-)
G118298 NA non-coding downstream 6611 16883568 ~ 16883778 (-)
G118294 NA non-coding downstream 19125 16871009 ~ 16871264 (-)
G118284 NA non-coding downstream 36277 16848891 ~ 16854112 (-)
G118286 NA non-coding downstream 37089 16851079 ~ 16853300 (-)
G118276 NA non-coding downstream 55394 16829842 ~ 16834995 (-)
G118308 NA non-coding upstream 3254 16901177 ~ 16901526 (-)
G118310 NA non-coding upstream 5896 16903819 ~ 16904168 (-)
G118312 NA non-coding upstream 7554 16905477 ~ 16905685 (-)
G118319 NA non-coding upstream 18698 16916621 ~ 16998362 (-)
G118339 NA non-coding upstream 56915 16954838 ~ 16956282 (-)
G118273 NA other downstream 62367 16827671 ~ 16828022 (-)
LOC110536122 LOC106573839 other downstream 684972 16203014 ~ 16208363 (-)
LOC110536103 s10ag other downstream 694772 16189940 ~ 16195762 (-)
LOC110534219 LOC106575505 other downstream 782413 16079813 ~ 16108032 (-)
LOC110518702 atp8b2 other downstream 930387 15898225 ~ 15982097 (-)
G118303 NA other upstream 35646 16933569 ~ 16934290 (-)
G118392 NA other upstream 153258 17051181 ~ 17055124 (-)
G118456 LOC100380853 other upstream 346201 17244124 ~ 17252276 (-)

Expression


Co-expression Network