Gene
RNA
| Item | Value |
|---|---|
| gene id | G118308 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 16901177 ~ 16901526 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: spindlin-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU136246 | True | 350 | lncRNA | 0.41 | 1 | 16901177 | 16901526 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536202 | LOC105024462 | coding | downstream | 30811 | 16835619 ~ 16870366 (-) |
| LOC118937862 | NA | coding | downstream | 355798 | 16544642 ~ 16545379 (-) |
| LOC118937856 | NA | coding | downstream | 356956 | 16543484 ~ 16544221 (-) |
| LOC110536191 | LOC106605933 | coding | downstream | 453671 | 16323418 ~ 16447506 (-) |
| LOC110519673 | LOC106605887 | coding | upstream | 171692 | 17073218 ~ 17141568 (-) |
| LOC110534246 | LOC106605885 | coding | upstream | 192721 | 17094247 ~ 17121323 (-) |
| LOC110520880 | LOC106605923 | coding | upstream | 476486 | 17378012 ~ 17382684 (-) |
| LOC118944171 | NA | coding | upstream | 479293 | 17380819 ~ 17380955 (-) |
| LOC118944170 | NA | coding | upstream | 479727 | 17381253 ~ 17381388 (-) |
| G118304 | LOC106575974 | non-coding | downstream | 3254 | 16890389 ~ 16897923 (-) |
| G118298 | NA | non-coding | downstream | 17399 | 16883568 ~ 16883778 (-) |
| G118294 | NA | non-coding | downstream | 29913 | 16871009 ~ 16871264 (-) |
| G118284 | NA | non-coding | downstream | 47065 | 16848891 ~ 16854112 (-) |
| G118286 | NA | non-coding | downstream | 47877 | 16851079 ~ 16853300 (-) |
| G118310 | NA | non-coding | upstream | 2293 | 16903819 ~ 16904168 (-) |
| G118312 | NA | non-coding | upstream | 3951 | 16905477 ~ 16905685 (-) |
| G118319 | NA | non-coding | upstream | 15095 | 16916621 ~ 16998362 (-) |
| G118339 | NA | non-coding | upstream | 53312 | 16954838 ~ 16956282 (-) |
| G118360 | NA | non-coding | upstream | 103253 | 17004779 ~ 17005003 (-) |
| G118273 | NA | other | downstream | 73155 | 16827671 ~ 16828022 (-) |
| LOC110536122 | LOC106573839 | other | downstream | 695760 | 16203014 ~ 16208363 (-) |
| LOC110536103 | s10ag | other | downstream | 705560 | 16189940 ~ 16195762 (-) |
| LOC110534219 | LOC106575505 | other | downstream | 793201 | 16079813 ~ 16108032 (-) |
| LOC110518702 | atp8b2 | other | downstream | 941175 | 15898225 ~ 15982097 (-) |
| G118303 | NA | other | upstream | 32043 | 16933569 ~ 16934290 (-) |
| G118392 | NA | other | upstream | 149655 | 17051181 ~ 17055124 (-) |
| G118456 | LOC100380853 | other | upstream | 342598 | 17244124 ~ 17252276 (-) |
