G118319


Basic Information

Item Value
gene id G118319
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 16916621 ~ 16998362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136263
tgtacatgtctgtgtCCTTCACCTGTCTATGTGTGGTGTGTATAATCAACCCAACCCtatttttgtgtatgtgtgtaaaccTGCATCTCTGACCCTCTGAACCTGCATTGAGGATCTTGCTAATTTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCATTGCACATCATGGTCAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCCCATGATCTCTCCAAGCTCAGCGTTGAGCAGATCTTTGAGTTCTCCCTTGCTCAGGGTCGTCTTGTCGCCCTCCTTGCCAGAGTACTTGTGGAAGGCTGAGATGAGCAATGCCATACTCTGCTGGACCTGTGACATGGTgactacgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatcaatgtTTTATTATGATAACAGGATGCTGGTGGACATGATGTCCACGCACAGAGAGAGGAATGTTTGCTTACTCTGTATTCACAGTATAATACATCTGATATTATCGACATCATTTGACTTTTTGAAATTTGAAATCACAGAAACTAAGTTAAAGGGATAAATGTCTCATTGTTGACTGAAAAATCCAATTCAAATCTATGTTATCTTACATCCGGGTTCCCATTTCATAAATGTCTGGGAAATAAAGTCATGTTGGCACTGGTTTAATCATGTTTAAACATAAGGTTCAGGTTGAATAGAGGGTTTAAAGAATATTAACGGTTGTTGCACACGAAGCAAAGActtaactacacacacaccacgcccCACTTCTGCTAACAGGTTCTACATCTCTACCacaaaggaagagaaagagagggggagaagagatggagagcaaCGCAACAGAGGCAattaaagagggagagaggtaagagatggagacatagggagagaggcggcgagagaaggaagagagaagcGGATATGGaggggagaaaggaagaggagagggggctgagttgtttaaacacaaacagacatGGCTCTAGCCAACGCCCTTGCAtgtctctctcattaactctggGGGATtttaaggagagaaagagagaagtatatatatatatagagagagaaagatagcgcgagagggacagacagacaaaaataCAGATTGTAGGAAATTGGTGGATCGGCTGAAAGGCGCGTTGGTAATTTCAGGCAAACGATAACATAGAAATCCCAGCACCTCCCCCACCCCTCACCTGTCTCCACCCTCTATCTATATAGTTTGCTTAAGGTgtgtctcttcactctgtccctTCACACATCTCGCCACTATGTAGGGAggttgctctctctcttctctctttctctacctgctCGTAGTCAAGGTGGTGTGAAGCTTCTGAGTTTAAGGAAGCTTCTGTAATGTGAATCCCTCATTTAGCTGACCCTCCTCTCAAGTGTGACTTGCAGTAAGTGCGGTCAAATAAGGACGTTGAAGCAACCATACAGTACGAACATGGTAAGCACAACATTATAGTTGTAAGGAACAATCCCAATCACTGTGGTGGACTCCACTGATCTCTCTCTGAGTCACTGTCAGCTGCCCCAGGACATTCAACCAGACACACGTTCTTATCCCCCCTCTGACTGCCCATCTGATAACTAGAAACACACTCTACTCACAGAATGGTcagagcgaggggagagagagtttatggtaaggacagagagagcgaaagagagagaggggggtgtggaGGATAGAAAGAGGTAGTGTTCTGCACTATGGAAGgattgagggaggaagagagagaggggaggaggaggaagagaagagagattcTTTCATCTAAACTGCGTAGTGCTCTGAGTAGCACCCACACATGTTTGAATGGAAAGGCAGACAAAGTTACGCCCTCCGCAGAGCTTGGCTCAAGATCATAAACAGTGTGGACAGGCACTTACCAACTGTTGCAAAGCACACCCTGAAGTCATTCATACTTTTGCAGTCAAGTATTAATCACTATAAAACATTAAACTACACACAATTACAAATAAATGTTGTAAACCACCCAATGAGAAAGTATAATTTGGCACATCTAACACCTCATAGATAAACACAGCTAAAACAAACTGAAGGTTTTATCAGAGAGGCACTCAGGTACATGTTTTACTAGGTTTAGTTTTCACTCACCGAAGTTGTGCGAGGAGTTGGacagtcagagaaagagagagagagggagagagagagagagagagagagagagagagatctatggTACCTTCAGGAAGCTGCCCAGTTCTGTCTGCATGAGTTCTTTCAGCTCCTTCTTGCTCAGTGTGTTACAGTCACCGTCCTTGTCGGCATAGCGATGGAACACCGTGATCAGGGACTGCAAGGATCTCTCCAATTGAGACGGCATGGCTGCAGAGAGAAGGATAcactgaggaggggagagagggagcggggagatggtaggggagagaaggaggagggagatgggaggggagacaAGGCGGAAGGGGGTGTAAAT
>TU136267
tgtacatgtctgtgtCCTTCACCTGTCTATGTGTGGTGTGTATAATCAACCCAACCCtatttttgtgtatgtgtgtaaaccTGCATCTCTGACCCTCTGAACCTGCATTGAGGATCTTGCTAATTTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCGTTGCACACCATGGTGAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCCTTGGTGAAGAACTCATTGCACATCATGGTCAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCCCCCATGATCTCTCCAAGCTCAGCGTTGAGCAGATCTTTGAGTTCTCCCTTGCTCAGGGTCGTCTTGTCGCCCTCCTTGCCAGAGTACTTGTGGAAGGCTGAGATGAGCAATGCCATACTCTGCTGGACCTGTGACATGGTgactacgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatcaatgtTTTATTATGATAACAGGATGCTGGTGGACATGATGTCCACGCACAGAGAGAGGAATGTTTGCTTACTCTGTATTCACAGTATAATACATCTGATATTATCGACATCATTTGACTTTTTGAAATTTGAAATCACAGAAACTAAGTTAAAGGGATAAATGTCTCATTGTTGACTGAAAAATCCAATTCAAATCTATGTTATCTTACATCCGGGTTCCCATTTCATAAATGTCTGGGAAATAAAGTCATGTTGGCACTGGTTTAATCATGTTTAAACATAAGGTTCAGGTTGAATAGAGGGTTTAAAGAATATTAACGGTTGTTGCACACGAAGCAAAGActtaactacacacacaccacgcccCACTTCTGCTAACAGGTTCTACATCTCTACCacaaaggaagagaaagagagggggagaagagatggagagcaaCGCAACAGAGGCAattaaagagggagagaggtaagagatggagacatagggagagaggcggcgagagaaggaagagagaagcGGATATGGaggggagaaaggaagaggagagggggctgagttgtttaaacacaaacagacatGGCTCTAGCCAACGCCCTTGCAtgtctctctcattaactctggGGGATtttaaggagagaaagagagaagtatatatatatatagagagagaaagatagcgcgagagggacagacagacaaaaataCAGATTGTAGGAAATTGGTGGATCGGCTGAAAGGCGCGTTGGTAATTTCAGGCAAACGATAACATAGAAATCCCAGCACCTCCCCCACCCCTCACCTGTCTCCACCCTCTATCTATATAGTTTGCTTAAGGTgtgtctcttcactctgtccctTCACACATCTCGCCACTATGTAGGGAggttgctctctctcttctctctttctctacctgctCGTAGTCAAGGTGGTGTGAAGCTTCTGAGTTTAAGGAAGCTTCTGTAATGTGAATCCCTCATTTAGCTGACCCTCCTCTCAAGTGTGACTTGCAGTAAGTGCGGTCAAATAAGGACGTTGAAGCAACCATACAGTACGAACATGGTAAGCACAACATTATAGTTGTAAGGAACAATCCCAATCACTGTGGTGGACTCCACTGATCTCTCTCTGAGTCACTGTCAGCTGCCCCAGGACATTCAACCAGACACACGTTCTTATCCCCCCTCTGACTGCCCATCTGATAACTAGAAACACACTCTACTCACAGAATGGTcagagcgaggggagagagagtttatggtaaggacagagagagcgaaagagagagaggggggtgtggaGGATAGAAAGAGGTAGTGTTCTGCACTATGGAAGgattgagggaggaagagagagaggggaggaggaggaagagaagagagattcTTTCATCTAAACTGCGTAGTGCTCTGAGTAGCACCCACACATGTTTGAATGGAAAGGCAGACAAAGTTACGCCCTCCGCAGAGCTTGGCTCAAGATCATAAACAGTGTGGACAGGCACTTACCAACTGTTGCAAAGCACACCCTGAAGTCATTCATACTTTTGCAGTCAAGTATTAATCACTATAAAACATTAAACTACACACAATTACAAATAAATGTTGTAAACCACCCAATGAGAAAGTATAATTTGGCACATCTAACACCTCATAGATAAACACAGCTAAAACAAACTGAAGGTTTTATCAGAGAGGCACTCAGGTACATGTTTTACTAGGTTTAGTTTTCACTCACCGAAGTTGTGCGAGGAGTTGGacagtcagagaaagagagagagagggagagagagagagagagagagagagagagagatctatggTACCTTCAGGAAGCTGCCCAGTTCTGTCTGCATGAGTTCTTTCAGCTCCTTCTTGCTCAGTGTGTTACAGTCACCGTCCTTGTCGGCATAGCGATGGAACACCGTGATCAGGGACTGCAAGGATCTCTCCAATTGAGACGGCATGGCTGCAGAGAGAAGGATAcactgaggaggggagagagggagcggggagatggtaggggagagaaggaggagggagatgggaggggagacaAGGCGGAAGGGGGTGTAAAT
>TU136266
CTTCCAAACATATTAAAATAGTTTATTTCGTTTTTCACTTTAAACAAACCAAAggcggcaaggtagcctagtggttagagagttggactagtaaccgaaaggtctgtcgttctgcccgtgaacaggcagttaacccactgttcctaccccgtcattgaaaataagaatttgttcttaactgacttgtctagttaagtaaaggtaaaaacatttaaaaaaaaa
>TU136257
CTTCCAAACATATTAAAATAGTTTATTTCGTTTTTCACTTTAAACAAACCAAAgAGCTTCCTCTCCATCTCATGAGATAGTAGcctatatgtctgtgtgtgtacatgtctgtgtctgtgtccttcacctgtctgtctatgtgtggtGTGTATAATCAACCCAACCCtttttctgtgtatgtgtgtaaaccTGCATCTCTGTCCCTTTGAACCTGCATGGAGGATCTTGCTAATCTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCATTGCACATCATGGTCAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCCCCCATGATCTCTCCAAGCTCAGCGTTGAGCAGATCTTTGAGTTCTCCCTTGCTCAGGGTCGTCTTGTCGCCCTCCTTGCCAGAGTACTTGTGGAAGGCTGAGATGAGCAATGCCATACTCTGCTGGACCTGTGACATGGTgactacgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagatcaatgtTTTATTATGATAACAGGATGCTGGTGGACATGATGTCCACGCACAGAGAGAGGAATGTTTGCTTACTCTGTATTCACAGTATAATACATCTGATATTATCGACATCATTTGACTTTTTGAAATTTGAAATCACAGAAACTAAGTTAAAGGGATAAATGTCTCATTGTTGACTGAAAAATCCAATTCAAATCTATGTTATCTTACATCCGGGTTCCCATTTCATAAATGTCTGGGAAATAAAGTCATGTTGGCACTGGTTTAATCATGTTTAAACATAAGGTTCAGGTTGAATAGAGGGTTTAAAGAATATTAACGGTTGTTGCACACGAAGCAAAGActtaactacacacacaccacgcccCACTTCTGCTAACAGGTTCTACATCTCTACCacaaaggaagagaaagagagggggagaagagatggagagcaaCGCAACAGAGGCAattaaagagggagagaggtaagagatggagacatagggagagaggcggcgagagaaggaagagagaagcGGATATGGaggggagaaaggaagaggagagggggctgagttgtttaaacacaaacagacatGGCTCTAGCCAACGCCCTTGCAtgtctctctcattaactctggGGGATtttaaggagagaaagagagaagtatatatatatatagagagagaaagatagcgcgagagggacagacagacaaaaataCAGATTGTAGGAAATTGGTGGATCGGCTGAAAGGCGCGTTGGTAATTTCAGGCAAACGATAACATAGAAATCCCAGCACCTCCCCCACCCCTCACCTGTCTCCACCCTCTATCTATATAGTTTGCTTAAGGTgtgtctcttcactctgtccctTCACACATCTCGCCACTATGTAGGGAggttgctctctctcttctctctttctctacctgctCGTAGTCAAGGTGGTGTGAAGCTTCTGAGTTTAAGGAAGCTTCTGTAATGTGAATCCCTCATTTAGCTGACCCTCCTCTCAAGTGTGACTTGCAGTAAGTGCGGTCAAATAAGGACGTTGAAGCAACCATACAGTACGAACATGGTAAGCACAACATTATAGTTGTAAGGAACAATCCCAATCACTGTGGTGGACTCCACTGATCTCTCTCTGAGTCACTGTCAGCTGCCCCAGGACATTCAACCAGACACACGTTCTTATCCCCCCTCTGACTGCCCATCTGATAACTAGAAACACACTCTACTCACAGAATGGTcagagcgaggggagagagagtttatggtaaggacagagagagcgaaagagagagaggggggtgtggaGGATAGAAAGAGGTAGTGTTCTGCACTATGGAAGgattgagggaggaagagagagaggggaggaggaggaagagaagagagattcTTTCATCTAAACTGCGTAGTGCTCTGAGTAGCACCCACACATGTTTGAATGGAAAGGCAGACAAAGTTACGCCCTCCGCAGAGCTTGGCTCAAGATCATAAACAGTGTGGACAGGCACTTACCAACTGTTGCAAAGCACACCCTGAAGTCATTCATACTTTTGCAGTCAAGTATTAATCACTATAAAACATTAAACTACACACAATTACAAATAAATGTTGTAAACCACCCAATGAGAAAGTATAATTTGGCACATCTAACACCTCATAGATAAACACAGCTAAAACAAACTGAAGGTTTTATCAGAGAGGCACTCAGGTACATGTTTTACTAGGTTTAGTTTTCACTCACCGAAGTTGTGCGAGGAGTTGGacagtcagagaaagagagagagagggaagggagagagagagagagagagagagag
>TU136258
tgtacatgtctgtgtCCTTCACCTGTCTATGTGTGGTGTGTATAATCAACCCAACCCtatttttgtgtatgtgtgtaaaccTGCATCTCTGACCCTCTGAACCTGCATTGAGGATCTTGCTAATTTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCGTTGCACACCATGGTGAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCactttaaaCAAACCAAAGAGCTTCCTCTCCATCTCATGAGATAGTAGcctatatgtctgtgtgtgtacatgtctgtgtctgtgtccttcacctgtctgtctatgtgtggtGTGTATAATCAACCCAACCCtttttctgtgtatgtgtgtaaaccTGCATCTCTGTCCCTTTGAACCTGCATGGAGGATCTTGCTAATCTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCATTGCACATCATGGTCAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCTGTTataatgatcagagagagagag
>TU136262
tgtacatgtctgtgtCCTTCACCTGTCTATGTGTGGTGTGTATAATCAACCCAACCCtatttttgtgtatgtgtgtaaaccTGCATCTCTGACCCTCTGAACCTGCATTGAGGATCTTGCTAATTTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCGTTGCACACCATGGTGAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTTCCCCCATGATCTCTCCAAGCTCAGCGTTGAGCAGATCTTTGAGTTCTCCCTTGCTCAGACTCGTCTTGTCGCCCTCCTTGCCAGAGTACTTGTGGAAGGCTGAGATGAGCAATGCCATACCCTGCTGGACCTGTGACATGGtgactacGAAGTTGTGCGAGGAGTTGGacagtcagagaaagagagagagggggagtgaggaagagagggatgggctGTTGGTTTTAAACATTGATTACCACACCccactctcccctttcctctccttgttcCTCTTTATCTGATGGAAATGGAAACTGCaatgttctgttctcttcttcATGTGAACTAGTTACTGAACGAATTATAATAGGCATATATATTATCTAAAGTTAATAATTACTTCACATGAATGTATCACCATTGTAACC
>TU136270
tgtacatgtctgtgtCCTTCACCTGTCTATGTGTGGTGTGTATAATCAACCCAACCCtatttttgtgtatgtgtgtaaaccTGCATCTCTGACCCTCTGAACCTGCATTGAGGATCTTGCTAATTTTATCATGAATTCACTCATGGAGCAAGAGCTGCTGTTCTGTGGAGAGTGGGCAGGGGGAGCTGTTTCACTTCTTGGTGAAGAACTCGTTGCACACCATGGTGAGGCAGGCCACCAGTGTGACGTACTCCTGGAAGTCCACACTGCCATCTGCGTTAGCGTCCAGATCTTTGAAGATCTTGTCAACCTTTGCCTGGTCAGTGTTTTCCCCATGATCTCTCCAAGCTCAGCGTTGAGCAGATCTTTGAGTTCTCCCTTGCTCAGACTCGTCTTGTCGCCCTCCTTGCCAGAGTACTTGTGGAAGGCTGAGATGAGCAATGCCATACCCTGCTGGACCTGTGACATGGtgactacaacacacaca

Function

NR:

description
PREDICTED: ictacalcin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136263 False 2655 lncRNA 0.46 4 16916621 16998093
TU136267 False 2762 lncRNA 0.38 4 16916621 16998093
TU136266 False 222 lncRNA 0.39 2 16935318 16998362
TU136257 False 2471 lncRNA 0.45 4 16968395 16998362
TU136258 False 762 lncRNA 0.39 2 16972394 16998093
TU136262 False 741 TUCP 0.55 3 16995520 16998093
TU136270 True 487 TUCP 0.43 2 16997350 16998093

Neighbor

gene id symbol gene type direction distance location
LOC110536202 LOC105024462 coding downstream 46255 16835619 ~ 16870366 (-)
LOC118937862 NA coding downstream 371242 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 372400 16543484 ~ 16544221 (-)
LOC110536191 LOC106605933 coding downstream 469115 16323418 ~ 16447506 (-)
LOC110519673 LOC106605887 coding upstream 74856 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding upstream 95885 17094247 ~ 17121323 (-)
LOC110520880 LOC106605923 coding upstream 379650 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 382457 17380819 ~ 17380955 (-)
LOC118944170 NA coding upstream 382891 17381253 ~ 17381388 (-)
G118312 NA non-coding downstream 10936 16905477 ~ 16905685 (-)
G118310 NA non-coding downstream 12453 16903819 ~ 16904168 (-)
G118308 NA non-coding downstream 15095 16901177 ~ 16901526 (-)
G118304 LOC106575974 non-coding downstream 18698 16890389 ~ 16897923 (-)
G118298 NA non-coding downstream 32843 16883568 ~ 16883778 (-)
G118360 NA non-coding upstream 6417 17004779 ~ 17005003 (-)
G118363 NA non-coding upstream 7882 17006244 ~ 17012736 (-)
G118370 NA non-coding upstream 14728 17013090 ~ 17013337 (-)
G118371 NA non-coding upstream 15092 17013454 ~ 17013864 (-)
G118392 NA non-coding upstream 52819 17051181 ~ 17055124 (-)
G118273 NA other downstream 88599 16827671 ~ 16828022 (-)
LOC110536122 LOC106573839 other downstream 711204 16203014 ~ 16208363 (-)
LOC110536103 s10ag other downstream 721004 16189940 ~ 16195762 (-)
LOC110534219 LOC106575505 other downstream 808645 16079813 ~ 16108032 (-)
LOC110518702 atp8b2 other downstream 956619 15898225 ~ 15982097 (-)
G118456 LOC100380853 other upstream 245762 17244124 ~ 17252276 (-)
G118494 NA other upstream 332753 17331115 ~ 17332028 (-)
LOC110520799 ash1l other upstream 475172 17455727 ~ 17484284 (-)
G118339 NA non-coding downstream 39238 16954838 ~ 16956282 (-)
G118303 NA other downstream 61230 16933569 ~ 16934290 (-)

Expression


Co-expression Network