G118370



Basic Information


Item Value
gene id G118370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17013090 ~ 17013337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU136328
gggaaaagtagggagtgactggcacacagacacagtggagcaaaagagcaaaagatatgtttacacatgatgacaccttgacctctcccctctctgcggcccatgcaacttagtcttgacatagaacagataactgccaatggccaccactatagtacaacaaaacacattcttatgagaaataactcataagcatatgatgaatataaaacatattaCCTATGTTACCAttccaattctgattattc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU136328 True 248 lncRNA 0.52 1 17013090 17013337

Neighbor


gene id symbol gene type direction distance location
LOC110536202 LOC105024462 coding downstream 142724 16835619 ~ 16870366 (-)
LOC118937862 NA coding downstream 467711 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 468869 16543484 ~ 16544221 (-)
LOC110536191 LOC106605933 coding downstream 565584 16323418 ~ 16447506 (-)
LOC110519673 LOC106605887 coding upstream 59881 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding upstream 80910 17094247 ~ 17121323 (-)
LOC110520880 LOC106605923 coding upstream 364675 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 367482 17380819 ~ 17380955 (-)
LOC118944170 NA coding upstream 367916 17381253 ~ 17381388 (-)
G118363 NA non-coding downstream 354 17006244 ~ 17012736 (-)
G118360 NA non-coding downstream 8087 17004779 ~ 17005003 (-)
G118319 NA non-coding downstream 14728 16916621 ~ 16998362 (-)
G118339 NA non-coding downstream 56808 16954838 ~ 16956282 (-)
G118312 NA non-coding downstream 107405 16905477 ~ 16905685 (-)
G118371 NA non-coding upstream 117 17013454 ~ 17013864 (-)
G118392 NA non-coding upstream 37844 17051181 ~ 17055124 (-)
G118393 NA non-coding upstream 42986 17056323 ~ 17056551 (-)
G118395 NA non-coding upstream 45115 17058452 ~ 17059564 (-)
G118396 NA non-coding upstream 47495 17060832 ~ 17061923 (-)
G118303 NA other downstream 78800 16933569 ~ 16934290 (-)
G118273 NA other downstream 185068 16827671 ~ 16828022 (-)
LOC110536122 LOC106573839 other downstream 807673 16203014 ~ 16208363 (-)
LOC110536103 s10ag other downstream 817473 16189940 ~ 16195762 (-)
G118456 LOC100380853 other upstream 230787 17244124 ~ 17252276 (-)
G118494 NA other upstream 317778 17331115 ~ 17332028 (-)
LOC110520799 ash1l other upstream 460197 17455727 ~ 17484284 (-)

Expression



Co-expression Network