Item | Value |
---|---|
gene id | G117780 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 17264622 ~ 17286752 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU135540 | True | 214 | lncRNA | 0.37 | 2 | 17264622 | 17286752 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110534250 | adar | coding | upstream | 103224 | 17141664 ~ 17161398 (+) |
LOC110536287 | LOC106605892 | coding | upstream | 209433 | 17026878 ~ 17055189 (+) |
LOC110534239 | LOC106594151 | coding | upstream | 260027 | 17002350 ~ 17004595 (+) |
LOC110536241 | LOC106606012 | coding | upstream | 263259 | 16998821 ~ 17001363 (+) |
LOC110536275 | s10i | coding | upstream | 266266 | 16995630 ~ 16998361 (+) |
LOC110520897 | NA | coding | downstream | 24376 | 17311128 ~ 17315827 (+) |
LOC110520882 | rab13 | coding | downstream | 96311 | 17383063 ~ 17394790 (+) |
LOC110520798 | fam189b | coding | downstream | 108591 | 17395343 ~ 17421816 (+) |
fdps | LOC106605924 | coding | downstream | 135304 | 17422056 ~ 17425996 (+) |
rusc1 | LOC106605889 | coding | downstream | 139680 | 17426432 ~ 17452486 (+) |
G117772 | LOC100380853 | non-coding | upstream | 9708 | 17243409 ~ 17254914 (+) |
G117750 | NA | non-coding | upstream | 100151 | 17164185 ~ 17164471 (+) |
G117711 | NA | non-coding | upstream | 192396 | 17068585 ~ 17072226 (+) |
G117708 | NA | non-coding | upstream | 199245 | 17065173 ~ 17065377 (+) |
G117793 | NA | non-coding | downstream | 11512 | 17298264 ~ 17299479 (+) |
G117807 | NA | non-coding | downstream | 31877 | 17318629 ~ 17319699 (+) |
G117809 | NA | non-coding | downstream | 37211 | 17323963 ~ 17324194 (+) |
G117811 | NA | non-coding | downstream | 40195 | 17326947 ~ 17327177 (+) |
G117813 | NA | non-coding | downstream | 46646 | 17333398 ~ 17334025 (+) |
G117714 | LOC106605886 | other | upstream | 190921 | 17073201 ~ 17073701 (+) |
G117704 | NA | other | upstream | 213783 | 17050132 ~ 17050839 (+) |
G117048 | NA | other | upstream | 1078838 | 16182890 ~ 16185784 (+) |
LOC110535842 | LOC106605985 | other | upstream | 1812934 | 15448845 ~ 15451856 (+) |
G117735 | NA | other | downstream | 169013 | 17455765 ~ 17458022 (+) |
LOC110536658 | LOC106577300 | other | downstream | 1170606 | 18457284 ~ 18481741 (+) |
G119153 | LOC106605761 | other | downstream | 1347087 | 18633839 ~ 18636041 (+) |
G119160 | NA | other | downstream | 1383761 | 18670513 ~ 18672320 (+) |