G117780



Basic Information


Item Value
gene id G117780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17264622 ~ 17286752 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU135540
ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcactctctctctctcatcctctcaaattcaaattcaaattcaagctgctttattggcatgaaaaacattgtgtcaatattgccaaagcaacaatgtatacaatatacattgtaacaaaat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU135540 True 214 lncRNA 0.37 2 17264622 17286752

Neighbor


gene id symbol gene type direction distance location
LOC110534250 adar coding upstream 103224 17141664 ~ 17161398 (+)
LOC110536287 LOC106605892 coding upstream 209433 17026878 ~ 17055189 (+)
LOC110534239 LOC106594151 coding upstream 260027 17002350 ~ 17004595 (+)
LOC110536241 LOC106606012 coding upstream 263259 16998821 ~ 17001363 (+)
LOC110536275 s10i coding upstream 266266 16995630 ~ 16998361 (+)
LOC110520897 NA coding downstream 24376 17311128 ~ 17315827 (+)
LOC110520882 rab13 coding downstream 96311 17383063 ~ 17394790 (+)
LOC110520798 fam189b coding downstream 108591 17395343 ~ 17421816 (+)
fdps LOC106605924 coding downstream 135304 17422056 ~ 17425996 (+)
rusc1 LOC106605889 coding downstream 139680 17426432 ~ 17452486 (+)
G117772 LOC100380853 non-coding upstream 9708 17243409 ~ 17254914 (+)
G117750 NA non-coding upstream 100151 17164185 ~ 17164471 (+)
G117711 NA non-coding upstream 192396 17068585 ~ 17072226 (+)
G117708 NA non-coding upstream 199245 17065173 ~ 17065377 (+)
G117793 NA non-coding downstream 11512 17298264 ~ 17299479 (+)
G117807 NA non-coding downstream 31877 17318629 ~ 17319699 (+)
G117809 NA non-coding downstream 37211 17323963 ~ 17324194 (+)
G117811 NA non-coding downstream 40195 17326947 ~ 17327177 (+)
G117813 NA non-coding downstream 46646 17333398 ~ 17334025 (+)
G117714 LOC106605886 other upstream 190921 17073201 ~ 17073701 (+)
G117704 NA other upstream 213783 17050132 ~ 17050839 (+)
G117048 NA other upstream 1078838 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1812934 15448845 ~ 15451856 (+)
G117735 NA other downstream 169013 17455765 ~ 17458022 (+)
LOC110536658 LOC106577300 other downstream 1170606 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1347087 18633839 ~ 18636041 (+)
G119160 NA other downstream 1383761 18670513 ~ 18672320 (+)

Expression



Co-expression Network