G117787


Basic Information

Item Value
gene id G117787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17281522 ~ 17289802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135548
ctctctctctctctctctctctctctctctctctctctctctctctctttctctctctctctcgttctctctctctcgttctctctctctctcgttctctcattctctctctctctcattctctctctctcgttctctctctctctcgttctctcattctctctctctctctctctctcgttctcgcttattctctctcgttctctctcattctctctcattctctttctatcgctctctatctctctctcgttctctcgttctctcattctctctcattctctcgttctctcattctttctcattctctctcattctctctctctctctatctctctatctctctatctctctatctctctcgttctctcgttctctcattctctcattctctcgttctctcgttctctcattctctctcattctctctcattctctctctctctctatctctctatctctctctctctatctctctctcgttctctctcattctctcgttctctctctctcgttctctatctctctctcattctctctctatcgctctctctctctatctctctctcattctctcgttctctctcattctcattctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135548 True 605 lncRNA 0.40 5 17281522 17289802

Neighbor

gene id symbol gene type direction distance location
LOC110534250 adar coding upstream 120124 17141664 ~ 17161398 (+)
LOC110536287 LOC106605892 coding upstream 226333 17026878 ~ 17055189 (+)
LOC110534239 LOC106594151 coding upstream 276927 17002350 ~ 17004595 (+)
LOC110536241 LOC106606012 coding upstream 280159 16998821 ~ 17001363 (+)
LOC110536275 s10i coding upstream 283166 16995630 ~ 16998361 (+)
LOC110520897 NA coding downstream 21326 17311128 ~ 17315827 (+)
LOC110520882 rab13 coding downstream 93261 17383063 ~ 17394790 (+)
LOC110520798 fam189b coding downstream 105541 17395343 ~ 17421816 (+)
fdps LOC106605924 coding downstream 132254 17422056 ~ 17425996 (+)
rusc1 LOC106605889 coding downstream 136630 17426432 ~ 17452486 (+)
G117781 NA non-coding upstream 13898 17267265 ~ 17267624 (+)
G117772 LOC100380853 non-coding upstream 26608 17243409 ~ 17254914 (+)
G117750 NA non-coding upstream 117051 17164185 ~ 17164471 (+)
G117711 NA non-coding upstream 209296 17068585 ~ 17072226 (+)
G117708 NA non-coding upstream 216145 17065173 ~ 17065377 (+)
G117793 NA non-coding downstream 8462 17298264 ~ 17299479 (+)
G117807 NA non-coding downstream 28827 17318629 ~ 17319699 (+)
G117809 NA non-coding downstream 34161 17323963 ~ 17324194 (+)
G117811 NA non-coding downstream 37145 17326947 ~ 17327177 (+)
G117813 NA non-coding downstream 43596 17333398 ~ 17334025 (+)
G117714 LOC106605886 other upstream 207821 17073201 ~ 17073701 (+)
G117704 NA other upstream 230683 17050132 ~ 17050839 (+)
G117048 NA other upstream 1095738 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1829834 15448845 ~ 15451856 (+)
G117735 NA other downstream 165963 17455765 ~ 17458022 (+)
LOC110536658 LOC106577300 other downstream 1167556 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1344037 18633839 ~ 18636041 (+)
G119160 NA other downstream 1380711 18670513 ~ 18672320 (+)

Expression


Co-expression Network