G117807


Basic Information

Item Value
gene id G117807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17318629 ~ 17319699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135573
tttaacggctcttttctggattttgatatttAGTGAgtgtcggcctaattctgctctgcatgcattatttggtgttctacgttgtacactgaggatatttttgcagaattctgcgtgcagagtctcaatttggtgtttgtcccattttgtgaagtcttggttggtgagcggaccccagacctcacaaccataaagggcaatgagatctatgactgattcaagtatttttagccaaatcctaattggtatgttgaaatttatgttccttttgatggcatagaatgcccttctcgccttgtctctcagatcgttcacagctttgttcAGCCCttaactctctatctctctcctttcttattcagcccttaactctctctctctctcctttcctattcagcccttgactctctctctctcctttcttattcagcccttaactctctctctcctttcttattcagccctgaacactctctctctctcctttcttattcagccttaactctctttcttattcagccttgactctctctctctctctttcttattcagccctgaactctctctctctctcctttcttattcagccctgaactctctctctctcctgtcttattcagccctgaactctctctctctctcctgtcttattcagccctgaactctctctctctctcctgtcttattcagccctgaactctctctctctctcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135573 True 714 lncRNA 0.41 4 17318629 17319699

Neighbor

gene id symbol gene type direction distance location
LOC110520897 NA coding upstream 2802 17311128 ~ 17315827 (+)
LOC110534250 adar coding upstream 157231 17141664 ~ 17161398 (+)
LOC110536287 LOC106605892 coding upstream 263440 17026878 ~ 17055189 (+)
LOC110534239 LOC106594151 coding upstream 314034 17002350 ~ 17004595 (+)
LOC110536241 LOC106606012 coding upstream 317266 16998821 ~ 17001363 (+)
LOC110520882 rab13 coding downstream 63364 17383063 ~ 17394790 (+)
LOC110520798 fam189b coding downstream 75644 17395343 ~ 17421816 (+)
fdps LOC106605924 coding downstream 102357 17422056 ~ 17425996 (+)
rusc1 LOC106605889 coding downstream 106733 17426432 ~ 17452486 (+)
dap3 LOC106605893 coding downstream 165126 17484825 ~ 17495968 (+)
G117793 NA non-coding upstream 19150 17298264 ~ 17299479 (+)
G117787 NA non-coding upstream 28827 17281522 ~ 17289802 (+)
G117780 NA non-coding upstream 31877 17264622 ~ 17286752 (+)
G117781 NA non-coding upstream 51005 17267265 ~ 17267624 (+)
G117772 LOC100380853 non-coding upstream 63715 17243409 ~ 17254914 (+)
G117809 NA non-coding downstream 4264 17323963 ~ 17324194 (+)
G117811 NA non-coding downstream 7248 17326947 ~ 17327177 (+)
G117813 NA non-coding downstream 13699 17333398 ~ 17334025 (+)
G117816 NA non-coding downstream 16158 17335857 ~ 17336202 (+)
G117817 NA non-coding downstream 19877 17339576 ~ 17340310 (+)
G117714 LOC106605886 other upstream 244928 17073201 ~ 17073701 (+)
G117704 NA other upstream 267790 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 320268 16995630 ~ 16998361 (+)
G117048 NA other upstream 1132845 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1866941 15448845 ~ 15451856 (+)
G117735 NA other downstream 136066 17455765 ~ 17458022 (+)
LOC110536658 LOC106577300 other downstream 1137659 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1314140 18633839 ~ 18636041 (+)
G119160 NA other downstream 1350814 18670513 ~ 18672320 (+)

Expression


Co-expression Network