G118462


Basic Information

Item Value
gene id G118462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17320914 ~ 17322386 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136472
CTCTGATAAAATAAAATTACAAAATCATTTCACCCTCAAACGCACCTCCCTTGTCcatgatttattattattaaagttttttattaatacatttatCATTAATTGTCAGGACGAATGAGAagaatactatagtataataatagtagaTATTAGCTATAACCGTTAAATCGTAATGGTAGAAAAGACTGAGCAATACAAACCTATGTAGATTTCAGTAACAGTATACTTACTGTACAGTACAATATTCCAAGCGGGTGTAATTCAGTATTCCGGCCACAGAATGTCACTATAAGACAGTTTTCAAATTGGTCTCCGTAGAAAGGGCTTACAGAAGAAAAATAATATCTTATTCCATCACATCATAATAATTATTCTCTCAGATATATAGTCTCTCCCTCTATAGGGTTAAGTTTTGTAAGCAACCGTTTCTCTCTTGCCATGGCCTGTATCCTTTGTCTGGTTAATATTCCTTAATTCCCTGTCTATGGCAGTCCATCGAGCACAGTGAAAAGTGCCGTCCACAAAGCACTAGTACTAGTCCAAATCCAATGTTCCTTGAAAAACATTGTCAGGAAATCTGAAactcctcttcccatctccccAGTGACATCCTCTTCTGCCTCTCTTTTGTAGTCCATTTGAGAGAGAGCACTTtggtagattgtgtgtgtgtgtgtccgaatGTGGGTGTGGTTCAGCGTATATGTGTGTGGGTTTAGGCATATCTGTGCCCCTGTGCAAACGGTGTGCTTGtggtttgaaatgtacagcaTACATTCATTAAAACAGAGTTTTGGGGACGTGTGCATAAGGAAATATGGCAGTAGTGTTTCCTTGGACCGTGTCTATGCTCTGTGTCAAGTAATAAATGCCTGGCAGTATGTTCTTTTCAGTTGGACTTAGTGCATTGTCTGCTTGGCAGTAATAGGCTATAGTATAGGCTGTACTATAGTGTTTTATAGTCTACTATAGTATGCTGCGCGATATtgtgtgctattttgtgtgtgtgtgtgtgtttgctgtgtaTTTTGTTGTGGTGTGTTTATGttgccatggtgtgtgtgtatgtgtgtgttaaaaGGTAGGCATACCacatggagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtttagtATGTATTATGGTCGTTGATTAAATGGTTAGTTAAAGGGATGCTCGTTACCACACAAGTAGCAGTTAGATAGAAAATAGATCAAAAGGacaaaaagtcatagtcaatcattcctgatggagggatgggagggaagagggcgagagatggagggagagaaagagatgaagagaaagagggatagagagggacgAATGGAAAAAGAGAGGAAGACGTTTTCCTGTCATTAGATTGGATTCCATTAAAGACCTCTGTAATTAGTCTTGGTTATCTgtttcccccttcctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136472 True 1429 lncRNA 0.37 2 17320914 17322386

Neighbor

gene id symbol gene type direction distance location
LOC110519673 LOC106605887 coding downstream 179346 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding downstream 199591 17094247 ~ 17121323 (-)
LOC110536202 LOC105024462 coding downstream 450548 16835619 ~ 16870366 (-)
LOC118937862 NA coding downstream 775535 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 776693 16543484 ~ 16544221 (-)
LOC110520880 LOC106605923 coding upstream 55626 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 58433 17380819 ~ 17380955 (-)
LOC118944170 NA coding upstream 58867 17381253 ~ 17381388 (-)
LOC110520799 ash1l coding upstream 133341 17455727 ~ 17484284 (-)
rnf115 LOC106591015 coding upstream 192698 17515084 ~ 17523082 (-)
G118461 NA non-coding downstream 31002 17264656 ~ 17289912 (-)
G118455 LOC106562530 non-coding downstream 70265 17243514 ~ 17250649 (-)
G118454 NA non-coding downstream 84167 17231541 ~ 17236747 (-)
G118398 adar non-coding downstream 159527 17151988 ~ 17161387 (-)
G118436 NA non-coding downstream 161853 17158596 ~ 17159061 (-)
G118490 NA non-coding upstream 421 17322807 ~ 17323020 (-)
G118493 NA non-coding upstream 4474 17326860 ~ 17327225 (-)
G118495 NA non-coding upstream 9833 17332219 ~ 17332480 (-)
G118497 NA non-coding upstream 15659 17338045 ~ 17338620 (-)
G118498 NA non-coding upstream 16772 17339158 ~ 17340283 (-)
G118456 LOC100380853 other downstream 68638 17244124 ~ 17252276 (-)
G118392 NA other downstream 265790 17051181 ~ 17055124 (-)
G118319 NA other downstream 322821 16916621 ~ 16998362 (-)
G118303 NA other downstream 386624 16933569 ~ 16934290 (-)
G118494 NA other upstream 8729 17331115 ~ 17332028 (-)
LOC110536309 LOC106574682 other upstream 342944 17663193 ~ 17666667 (-)
G118606 NA other upstream 359636 17682022 ~ 17710023 (-)
LOC118938160 LOC106574957 other upstream 587107 17809976 ~ 17919784 (-)

Expression


Co-expression Network