G117811


Basic Information

Item Value
gene id G117811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17326947 ~ 17327177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135577
gccactccacatgaactgaaacacaagcctcactagaggcctcctcagactagccggcaatgggtagatgtacgccaaatacaaaagagacggcaacacatccacctttagaaccaggactttgcccataaaagacaaatacctagccttccacattgctagcttcctctgtacccctgcgatacgcatgttccagtttagcgtcgctgagccggaggtctcaaaatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU135577 True 231 lncRNA 0.50 1 17326947 17327177

Neighbor

gene id symbol gene type direction distance location
LOC100135972 LOC100135972 coding upstream 4528 17169568 ~ 17322419 (+)
LOC110520897 NA coding upstream 11120 17311128 ~ 17315827 (+)
LOC110534250 adar coding upstream 165549 17141664 ~ 17161398 (+)
LOC110536287 LOC106605892 coding upstream 271758 17026878 ~ 17055189 (+)
LOC110534239 LOC106594151 coding upstream 322352 17002350 ~ 17004595 (+)
LOC110520882 rab13 coding downstream 55886 17383063 ~ 17394790 (+)
LOC110520798 fam189b coding downstream 68166 17395343 ~ 17421816 (+)
fdps LOC106605924 coding downstream 94879 17422056 ~ 17425996 (+)
rusc1 LOC106605889 coding downstream 99255 17426432 ~ 17452486 (+)
dap3 LOC106605893 coding downstream 157648 17484825 ~ 17495968 (+)
G117809 NA non-coding upstream 2753 17323963 ~ 17324194 (+)
G117807 NA non-coding upstream 7248 17318629 ~ 17319699 (+)
G117793 NA non-coding upstream 27468 17298264 ~ 17299479 (+)
G117787 NA non-coding upstream 37145 17281522 ~ 17289802 (+)
G117780 NA non-coding upstream 40195 17264622 ~ 17286752 (+)
G117813 NA non-coding downstream 6221 17333398 ~ 17334025 (+)
G117816 NA non-coding downstream 8680 17335857 ~ 17336202 (+)
G117817 NA non-coding downstream 12399 17339576 ~ 17340310 (+)
G117818 NA non-coding downstream 26930 17354107 ~ 17355366 (+)
G117728 NA non-coding downstream 50835 17378012 ~ 17382571 (+)
G117714 LOC106605886 other upstream 253246 17073201 ~ 17073701 (+)
G117704 NA other upstream 276108 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 328586 16995630 ~ 16998361 (+)
G117048 NA other upstream 1141163 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1875259 15448845 ~ 15451856 (+)
G117735 NA other downstream 128588 17455765 ~ 17458022 (+)
LOC110536658 LOC106577300 other downstream 1130181 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1306662 18633839 ~ 18636041 (+)
G119160 NA other downstream 1343336 18670513 ~ 18672320 (+)

Expression


Co-expression Network