G117813


Basic Information

Item Value
gene id G117813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17333398 ~ 17334025 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135579
tgtagtctgtcaggtctttacagagcctttatgtgtgtccctaatgtagacagtagtgtagtctgtcaggtctttacagagcctttaggtgagtccctaatgtagacagtagtgtagtctgtcagatctttacagagcctttatgtgtgtccctaatgtagacagtagtgtagtctgtcagatctttacagagcctttaggtgagtccctaatgtagacagtagtgtagtctgtcagatctttacagagcctttaggtgagtccctaatgtagacagtagtgtagtctgtcagatctttacagagcctttaggtgtgtccctaatgtagacagtagtgtagtctgtcagatctaatgtagacagtagtgtagtctgtcagatctttacagagcctttaggtgagtccctaatgtagacagtagtgtagtctgtcagatctttacagagcctttaggtgagtccctaatgtagacagtagtgtagtctgtcaggtctaatgtagacagtagtgtagtctgtcagatctaatgtagacagtagtgtagtctgtcaggtctttacagagcctttaggtgtgtccctaatgtagacagtagtgtagtctgtcagatctttacagagccttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135579 True 628 lncRNA 0.42 1 17333398 17334025

Neighbor

gene id symbol gene type direction distance location
LOC100135972 LOC100135972 coding upstream 10979 17169568 ~ 17322419 (+)
LOC110520897 NA coding upstream 17571 17311128 ~ 17315827 (+)
LOC110534250 adar coding upstream 172000 17141664 ~ 17161398 (+)
LOC110536287 LOC106605892 coding upstream 278209 17026878 ~ 17055189 (+)
LOC110534239 LOC106594151 coding upstream 328803 17002350 ~ 17004595 (+)
LOC110520882 rab13 coding downstream 49038 17383063 ~ 17394790 (+)
LOC110520798 fam189b coding downstream 61318 17395343 ~ 17421816 (+)
fdps LOC106605924 coding downstream 88031 17422056 ~ 17425996 (+)
rusc1 LOC106605889 coding downstream 92407 17426432 ~ 17452486 (+)
dap3 LOC106605893 coding downstream 150800 17484825 ~ 17495968 (+)
G117811 NA non-coding upstream 6221 17326947 ~ 17327177 (+)
G117809 NA non-coding upstream 9204 17323963 ~ 17324194 (+)
G117807 NA non-coding upstream 13699 17318629 ~ 17319699 (+)
G117793 NA non-coding upstream 33919 17298264 ~ 17299479 (+)
G117787 NA non-coding upstream 43596 17281522 ~ 17289802 (+)
G117816 NA non-coding downstream 1832 17335857 ~ 17336202 (+)
G117817 NA non-coding downstream 5551 17339576 ~ 17340310 (+)
G117818 NA non-coding downstream 20082 17354107 ~ 17355366 (+)
G117728 NA non-coding downstream 43987 17378012 ~ 17382571 (+)
G117839 NA non-coding downstream 72178 17406203 ~ 17407798 (+)
G117714 LOC106605886 other upstream 259697 17073201 ~ 17073701 (+)
G117704 NA other upstream 282559 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 335037 16995630 ~ 16998361 (+)
G117048 NA other upstream 1147614 16182890 ~ 16185784 (+)
LOC110535842 LOC106605985 other upstream 1881710 15448845 ~ 15451856 (+)
G117735 NA other downstream 121740 17455765 ~ 17458022 (+)
LOC110536658 LOC106577300 other downstream 1123333 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1299814 18633839 ~ 18636041 (+)
G119160 NA other downstream 1336488 18670513 ~ 18672320 (+)

Expression


Co-expression Network