G118498


Basic Information

Item Value
gene id G118498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17339158 ~ 17340283 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136512
gacacacataaaggctctgtaaagatctgacagactacactactgtctacattagggacacacataaaggctctgtaaagatctgacagactacactactgtctacattagatctgacagactacactactgtctacattagggacacacataaaggctctgtaaagacctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagatctgacagactacactactgtctacattagggacacacctaaaggctctgtaaagatctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagatctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagatctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagacctgacagactacactactgtctacattagatctgacagactacactactgtctacattagggacacacctaaaggctctgtaaagacctgacagactacactactgtctacattagggacacacataaaggctctgtaaagatctgacagactacactactgtctacattagatctgacagactacactactgtctacattagggacacacctaaaggctctgtaaagacctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagacctgacagactacactactgtctacattagggacacacataaaggctctgtaaagacctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagacctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagatctgacagactacactactgtctacattagatctgacagactacactactgtctacattagggactcacctaaaggctctgtaaagacctgacagactacactactgtctacattagggacacacctaaaggctctgtaaagacctgacagactacactactgtctacattagggactcaCCTAAAGGCTATGTAAagacctgacagactacactacagtctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136512 True 1126 lncRNA 0.47 1 17339158 17340283

Neighbor

gene id symbol gene type direction distance location
LOC110519673 LOC106605887 coding downstream 197590 17073218 ~ 17141568 (-)
LOC110534246 LOC106605885 coding downstream 217835 17094247 ~ 17121323 (-)
LOC110536202 LOC105024462 coding downstream 468792 16835619 ~ 16870366 (-)
LOC118937862 NA coding downstream 793779 16544642 ~ 16545379 (-)
LOC118937856 NA coding downstream 794937 16543484 ~ 16544221 (-)
LOC110520880 LOC106605923 coding upstream 37729 17378012 ~ 17382684 (-)
LOC118944171 NA coding upstream 40536 17380819 ~ 17380955 (-)
LOC118944170 NA coding upstream 40970 17381253 ~ 17381388 (-)
LOC110520799 ash1l coding upstream 115444 17455727 ~ 17484284 (-)
rnf115 LOC106591015 coding upstream 174801 17515084 ~ 17523082 (-)
G118497 NA non-coding downstream 538 17338045 ~ 17338620 (-)
G118495 NA non-coding downstream 6678 17332219 ~ 17332480 (-)
G118493 NA non-coding downstream 11933 17326860 ~ 17327225 (-)
G118490 NA non-coding downstream 16138 17322807 ~ 17323020 (-)
G118462 NA non-coding downstream 16772 17320914 ~ 17322386 (-)
G118505 NA non-coding upstream 28541 17368824 ~ 17369044 (-)
G118509 NA non-coding upstream 32999 17373282 ~ 17373585 (-)
G118510 NA non-coding upstream 34407 17374690 ~ 17376660 (-)
G118549 NA non-coding upstream 61265 17401548 ~ 17401940 (-)
G118494 NA other downstream 7130 17331115 ~ 17332028 (-)
G118456 LOC100380853 other downstream 86882 17244124 ~ 17252276 (-)
G118392 NA other downstream 284034 17051181 ~ 17055124 (-)
G118319 NA other downstream 341065 16916621 ~ 16998362 (-)
LOC110536309 LOC106574682 other upstream 325047 17663193 ~ 17666667 (-)
G118606 NA other upstream 341739 17682022 ~ 17710023 (-)
LOC118938160 LOC106574957 other upstream 569210 17809976 ~ 17919784 (-)
LOC110536375 LOC106575046 other upstream 659190 17999431 ~ 18009077 (-)

Expression


Co-expression Network