G117735


Basic Information

Item Value
gene id G117735
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17455765 ~ 17458022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135495
TCAATGTTTGAAATGACATTCTGTCAGATGAACTCTGTGGTATTTTCTCCAAAGACAGGTTATAAGCAGCAATTTAAATTGTACAACAAAGGGCTGGATTCTCACCGCATCGCAGAAGTATCATGGGAGATCTGCGTTATAGCTCCatttaaatttaaaggcaatgttcccgcgttcGTGGAGACTGAATTCACGATAAATGACCTTTACACTtccgcgatacggattgaatccagcccaaAGTTACATTTCATGCAAACTACATAAATAACCCTTCACTATATTGATGAATGCTATAATATTCCTCATCACCCGTTGGCAATAGTGAGTGAGGCAAATACACAGGTCAACTATAAAACATTCAACTTAGTGTTCAAAGTCAAACTAGAAACTGCACCAAAGAGAACTGTACAAATGAACGGTTACAAATCTCAGATTCAATTCATTTTCCTGATTGTCTGACCAAATAAAAAAGAACATTTCATCAGTCAGAAAAAGTATACAGATGAAGAGAAGTCATATTCAACATAGGTCAGTTATGTTTAACACTTTGTAGCAAAATGAAGGCCTTTGACTATTAACTTTAACGCTTAGATAATAACTATCTATTATGAAACTGATTCATTACATTACTTAGGTCAATGTTACTGCATTATCATTGGTACAATATAACGATCTTGAAATGATCATATTCACTAAGGCAATAAAAACTACTTGGTTTGATACATAGAAGGGTCTCTAGCTGGTACTGGTAGTGATATTAAAGTTGTTGTACTGAAATCCTTACAGGACGTATTGCTTTTGGAGATTGAACTCACTTAGGCGTCAGTTTATTTACAACATGGCACTTTTACATTAAAGGCCCGATTCAATACGTAGAGCTGAAGAAAacaaggcaatgttcccgcgttagCGGAGACTGAATTCACGGAAAAACTGCATAGgtcggctcaattggaaattacctttacagtTGAATCACACTATAGCGCCGTACTTCAGCAACAGGGATTGAATCAAATCATAGGGGCTGTGTATTGCGGAAGTATCGCAGAAGATCTGCATAAAAATGTAGAGGTaggcctcccaagtggtgcagcggtctatggcagcggtctatggcactgcatcgcagtgttgcgatgtcactacagcctggggttcgatcccaggctgtgtccgggagtcccatagggcagcgcacaattggcccagggttgtCCGGGTTAGTGGAAGGTTTGGCCCGGGGGAgcctttacttggctcatcgcgctctagcgactccttgtggcaggccaggCACCTGCAAGCTGACAGTCGTCAGTTGGCCGGTGTTTCCTCCAATACATTCCGGGTTAAGCAcgcaggtgttaagaagcgtcACTTGGATCACgctttggaggacgcatgactcgaccttcgcctgtCCGAGCCCATTGGGTAgttacagcgatgagacaagatcgtaattggatcgcaattggatatcacaaaaaaggAGGTAAAATTGTAAAAAAGGATATTGTCATGGTCATTTCAGATTGAACCGAcgtgcagcgtttaccgtgaatgtagTCTGAATGTAGTCTGAATGTAATCTGAATGTAGTCTGAATGTAATCTGAATGTAGTCTGAATGTAGTCTGAATGTAGTCTGAATGTAATCTGAATGTAGTCTGAATGTAATCTGAATGTAGTCTGAATGTAGTCTGAATGTAGTCTGAATGTAATCTGCGAGAACACGGGAACATTTCCTTTACATTTAAATCGAGCTACAACGCGGATCTTCCACAATACGAATTTAATCCAGCCTTAAGACTCTAtggtctccatccatcccttccgcCCTCTCTGACTATTAAATCAGACTGTCACTGGTCTGCTGACTGTCTGTCAATCATTCTCAATGGTACAGTAAACAACACCCTCATTCCTCTCAGAAACAAAGCCCAAAATCATCTTTATAACAAATCATTTCAGGGAAGCGTTTTCCCCCCCAACACTAGTGCAAAGTTAGCTGAACTGAGCTACTTGGAAGAAGAAGAGATACTGAGCTGAGATttcccccctccttccttccttgtcCTCTCTCACCAATCATGTCTGCCGCAGCTTCAGCAGTATGTTGTTCAGTCGCTCCTTCCGGacctccctccagccctcctcttcctcctccacctgttTTTTCTCCTCTTGTCTGTTCTCA

Function

NR:

description
hypothetical protein EH28_17514

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135495 True 2205 TUCP 0.48 2 17455765 17458022

Neighbor

gene id symbol gene type direction distance location
rusc1 LOC106605889 coding upstream 3279 17426432 ~ 17452486 (+)
fdps LOC106605924 coding upstream 29769 17422056 ~ 17425996 (+)
LOC110520798 fam189b coding upstream 41876 17395343 ~ 17421816 (+)
LOC110520882 rab13 coding upstream 60975 17383063 ~ 17394790 (+)
LOC100135972 LOC100135972 coding upstream 133346 17169568 ~ 17322419 (+)
dap3 LOC106605893 coding downstream 26803 17484825 ~ 17495968 (+)
gba gba coding downstream 48553 17506575 ~ 17515027 (+)
polr3c LOC106605790 coding downstream 65062 17523084 ~ 17532237 (+)
LOC110536418 LOC106575022 coding downstream 558773 18016795 ~ 18047915 (+)
LOC110536431 LOC107573682 coding downstream 594483 18052505 ~ 18071232 (+)
G117842 NA non-coding upstream 12153 17442891 ~ 17443612 (+)
G117839 NA non-coding upstream 47967 17406203 ~ 17407798 (+)
G117728 NA non-coding upstream 73194 17378012 ~ 17382571 (+)
G117818 NA non-coding upstream 100399 17354107 ~ 17355366 (+)
G117864 NA non-coding downstream 41916 17499938 ~ 17500230 (+)
G117865 NA non-coding downstream 42624 17500646 ~ 17501204 (+)
G117883 NA non-coding downstream 78498 17536520 ~ 17543637 (+)
G117943 NA non-coding downstream 202762 17660784 ~ 17661055 (+)
G117926 NA non-coding downstream 225665 17683687 ~ 17686455 (+)
G117714 LOC106605886 other upstream 382064 17073201 ~ 17073701 (+)
G117704 NA other upstream 404926 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 457404 16995630 ~ 16998361 (+)
G117048 NA other upstream 1269981 16182890 ~ 16185784 (+)
LOC110536658 LOC106577300 other downstream 999336 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1175817 18633839 ~ 18636041 (+)
G119160 NA other downstream 1212491 18670513 ~ 18672320 (+)
G119245 stl2 other downstream 1501114 18934673 ~ 18992769 (+)
LOC110503718 LOC102193556 other downstream 1798564 19131905 ~ 19259074 (+)

Expression


Co-expression Network