G117864


Basic Information

Item Value
gene id G117864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17499938 ~ 17500230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135683
caagcggaacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacatttttccccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135683 True 293 lncRNA 0.41 1 17499938 17500230

Neighbor

gene id symbol gene type direction distance location
dap3 LOC106605893 coding upstream 3970 17484825 ~ 17495968 (+)
rusc1 LOC106605889 coding upstream 47452 17426432 ~ 17452486 (+)
fdps LOC106605924 coding upstream 73942 17422056 ~ 17425996 (+)
LOC110520798 fam189b coding upstream 86049 17395343 ~ 17421816 (+)
LOC110520882 rab13 coding upstream 105148 17383063 ~ 17394790 (+)
gba gba coding downstream 6345 17506575 ~ 17515027 (+)
polr3c LOC106605790 coding downstream 22854 17523084 ~ 17532237 (+)
LOC110536418 LOC106575022 coding downstream 516565 18016795 ~ 18047915 (+)
LOC110536431 LOC107573682 coding downstream 552275 18052505 ~ 18071232 (+)
trim108 LOC106573777 coding downstream 576741 18076971 ~ 18086938 (+)
G117842 NA non-coding upstream 56326 17442891 ~ 17443612 (+)
G117839 NA non-coding upstream 92140 17406203 ~ 17407798 (+)
G117728 NA non-coding upstream 117367 17378012 ~ 17382571 (+)
G117818 NA non-coding upstream 144572 17354107 ~ 17355366 (+)
G117865 NA non-coding downstream 416 17500646 ~ 17501204 (+)
G117883 NA non-coding downstream 36290 17536520 ~ 17543637 (+)
G117943 NA non-coding downstream 160554 17660784 ~ 17661055 (+)
G117926 NA non-coding downstream 183457 17683687 ~ 17686455 (+)
G117959 NA non-coding downstream 222531 17722761 ~ 17723043 (+)
G117735 NA other upstream 41916 17455765 ~ 17458022 (+)
G117714 LOC106605886 other upstream 426237 17073201 ~ 17073701 (+)
G117704 NA other upstream 449099 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 501577 16995630 ~ 16998361 (+)
LOC110536658 LOC106577300 other downstream 957128 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 1133609 18633839 ~ 18636041 (+)
G119160 NA other downstream 1170283 18670513 ~ 18672320 (+)
G119245 stl2 other downstream 1458906 18934673 ~ 18992769 (+)
LOC110503718 LOC102193556 other downstream 1756356 19131905 ~ 19259074 (+)

Expression


Co-expression Network