Gene
RNA
| Item | Value |
|---|---|
| gene id | G117865 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 17500646 ~ 17501204 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135684 | True | 410 | lncRNA | 0.42 | 2 | 17500646 | 17501204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| dap3 | LOC106605893 | coding | upstream | 4678 | 17484825 ~ 17495968 (+) |
| rusc1 | LOC106605889 | coding | upstream | 48160 | 17426432 ~ 17452486 (+) |
| fdps | LOC106605924 | coding | upstream | 74650 | 17422056 ~ 17425996 (+) |
| LOC110520798 | fam189b | coding | upstream | 86757 | 17395343 ~ 17421816 (+) |
| LOC110520882 | rab13 | coding | upstream | 105856 | 17383063 ~ 17394790 (+) |
| gba | gba | coding | downstream | 5371 | 17506575 ~ 17515027 (+) |
| polr3c | LOC106605790 | coding | downstream | 21880 | 17523084 ~ 17532237 (+) |
| LOC110536418 | LOC106575022 | coding | downstream | 515591 | 18016795 ~ 18047915 (+) |
| LOC110536431 | LOC107573682 | coding | downstream | 551301 | 18052505 ~ 18071232 (+) |
| trim108 | LOC106573777 | coding | downstream | 575767 | 18076971 ~ 18086938 (+) |
| G117864 | NA | non-coding | upstream | 416 | 17499938 ~ 17500230 (+) |
| G117842 | NA | non-coding | upstream | 57034 | 17442891 ~ 17443612 (+) |
| G117839 | NA | non-coding | upstream | 92848 | 17406203 ~ 17407798 (+) |
| G117728 | NA | non-coding | upstream | 118075 | 17378012 ~ 17382571 (+) |
| G117883 | NA | non-coding | downstream | 35316 | 17536520 ~ 17543637 (+) |
| G117943 | NA | non-coding | downstream | 159580 | 17660784 ~ 17661055 (+) |
| G117926 | NA | non-coding | downstream | 182483 | 17683687 ~ 17686455 (+) |
| G117959 | NA | non-coding | downstream | 221557 | 17722761 ~ 17723043 (+) |
| G117960 | NA | non-coding | downstream | 222040 | 17723244 ~ 17723459 (+) |
| G117735 | NA | other | upstream | 42624 | 17455765 ~ 17458022 (+) |
| G117714 | LOC106605886 | other | upstream | 426945 | 17073201 ~ 17073701 (+) |
| G117704 | NA | other | upstream | 449807 | 17050132 ~ 17050839 (+) |
| LOC110536275 | s10i | other | upstream | 502285 | 16995630 ~ 16998361 (+) |
| LOC110536658 | LOC106577300 | other | downstream | 956154 | 18457284 ~ 18481741 (+) |
| G119153 | LOC106605761 | other | downstream | 1132635 | 18633839 ~ 18636041 (+) |
| G119160 | NA | other | downstream | 1169309 | 18670513 ~ 18672320 (+) |
| G119245 | stl2 | other | downstream | 1457932 | 18934673 ~ 18992769 (+) |
| LOC110503718 | LOC102193556 | other | downstream | 1755382 | 19131905 ~ 19259074 (+) |
