G118578


Basic Information

Item Value
gene id G118578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17505305 ~ 17505774 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136602
cttcaacctcaggaggctgaagaaatttggctagtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgtcgggctgtatcaccgcctggtaagtcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcactgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaaggccataaagatcatcaaggacaaccaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctatctcaagaccatcagactgttaaacagccaccactaacattgagtggctgctgccaacacattgactcaactccagccactttaataatgggaattgatgggaattgatgtaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136602 True 470 lncRNA 0.45 1 17505305 17505774

Neighbor

gene id symbol gene type direction distance location
LOC110520799 ash1l coding downstream 21021 17455727 ~ 17484284 (-)
LOC110520880 LOC106605923 coding downstream 122621 17378012 ~ 17382684 (-)
LOC118944170 NA coding downstream 123917 17381253 ~ 17381388 (-)
LOC118944171 NA coding downstream 124350 17380819 ~ 17380955 (-)
LOC110534246 LOC106605885 coding downstream 383982 17094247 ~ 17121323 (-)
rnf115 LOC106591015 coding upstream 9310 17515084 ~ 17523082 (-)
itga10 LOC106595728 coding upstream 26913 17532687 ~ 17603672 (-)
crabp2a LOC106605806 coding upstream 118360 17624134 ~ 17636768 (-)
LOC110536309 LOC106574682 coding upstream 157419 17663193 ~ 17666667 (-)
arnt arnt coding upstream 162108 17667882 ~ 17681708 (-)
G118575 NA non-coding downstream 2459 17501611 ~ 17502846 (-)
G118572 NA non-coding downstream 6882 17498155 ~ 17498423 (-)
G118527 NA non-coding downstream 8968 17496115 ~ 17496337 (-)
G118521 LOC106605797 non-coding downstream 50590 17448699 ~ 17454715 (-)
G118551 NA non-coding downstream 97903 17406659 ~ 17407402 (-)
G118582 polr3c non-coding upstream 18789 17524563 ~ 17532233 (-)
G118629 NA non-coding upstream 123830 17629604 ~ 17630375 (-)
G118660 NA non-coding upstream 219409 17725183 ~ 17725386 (-)
G118662 NA non-coding upstream 221917 17727691 ~ 17727951 (-)
G118663 NA non-coding upstream 222880 17728654 ~ 17729002 (-)
G118494 NA other downstream 173277 17331115 ~ 17332028 (-)
G118456 LOC100380853 other downstream 253029 17244124 ~ 17252276 (-)
G118392 NA other downstream 450181 17051181 ~ 17055124 (-)
G118606 NA other upstream 176248 17682022 ~ 17710023 (-)
LOC118938160 LOC106574957 other upstream 403719 17809976 ~ 17919784 (-)
LOC110536375 LOC106575046 other upstream 493699 17999431 ~ 18009077 (-)
LOC110536462 LOC108436080 other upstream 626700 18127347 ~ 18153075 (-)

Expression


Co-expression Network