Gene
RNA
| Item | Value |
|---|---|
| gene id | G117883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 17536520 ~ 17543637 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135710 | True | 1090 | lncRNA | 0.35 | 3 | 17536520 | 17543637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| polr3c | LOC106605790 | coding | upstream | 4283 | 17523084 ~ 17532237 (+) |
| gba | gba | coding | upstream | 21493 | 17506575 ~ 17515027 (+) |
| dap3 | LOC106605893 | coding | upstream | 40552 | 17484825 ~ 17495968 (+) |
| rusc1 | LOC106605889 | coding | upstream | 84034 | 17426432 ~ 17452486 (+) |
| fdps | LOC106605924 | coding | upstream | 110524 | 17422056 ~ 17425996 (+) |
| LOC110536418 | LOC106575022 | coding | downstream | 473158 | 18016795 ~ 18047915 (+) |
| LOC110536431 | LOC107573682 | coding | downstream | 508868 | 18052505 ~ 18071232 (+) |
| trim108 | LOC106573777 | coding | downstream | 533334 | 18076971 ~ 18086938 (+) |
| LOC110536448 | NA | coding | downstream | 546671 | 18090308 ~ 18094143 (+) |
| LOC110536617 | NA | coding | downstream | 734024 | 18277408 ~ 18278953 (+) |
| G117865 | NA | non-coding | upstream | 35316 | 17500646 ~ 17501204 (+) |
| G117864 | NA | non-coding | upstream | 36290 | 17499938 ~ 17500230 (+) |
| G117842 | NA | non-coding | upstream | 92908 | 17442891 ~ 17443612 (+) |
| LOC110520798 | fam189b | non-coding | upstream | 114704 | 17395343 ~ 17421816 (+) |
| G117839 | NA | non-coding | upstream | 128722 | 17406203 ~ 17407798 (+) |
| G117943 | NA | non-coding | downstream | 117147 | 17660784 ~ 17661055 (+) |
| G117926 | NA | non-coding | downstream | 140050 | 17683687 ~ 17686455 (+) |
| G117959 | NA | non-coding | downstream | 179124 | 17722761 ~ 17723043 (+) |
| G117960 | NA | non-coding | downstream | 179607 | 17723244 ~ 17723459 (+) |
| G117961 | NA | non-coding | downstream | 180764 | 17724401 ~ 17724628 (+) |
| G117735 | NA | other | upstream | 78498 | 17455765 ~ 17458022 (+) |
| G117714 | LOC106605886 | other | upstream | 462819 | 17073201 ~ 17073701 (+) |
| G117704 | NA | other | upstream | 485681 | 17050132 ~ 17050839 (+) |
| LOC110536275 | s10i | other | upstream | 538159 | 16995630 ~ 16998361 (+) |
| LOC110536658 | LOC106577300 | other | downstream | 913721 | 18457284 ~ 18481741 (+) |
| G119153 | LOC106605761 | other | downstream | 1090202 | 18633839 ~ 18636041 (+) |
| G119160 | NA | other | downstream | 1126876 | 18670513 ~ 18672320 (+) |
| G119245 | stl2 | other | downstream | 1415499 | 18934673 ~ 18992769 (+) |
| LOC110503718 | LOC102193556 | other | downstream | 1712949 | 19131905 ~ 19259074 (+) |
