Gene
RNA
| Item | Value |
|---|---|
| gene id | G118014 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 17815004 ~ 17815832 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ADAMTS-like protein 4 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU135869 | True | 465 | lncRNA | 0.39 | 2 | 17815004 | 17815832 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| polr3c | LOC106605790 | coding | upstream | 282767 | 17523084 ~ 17532237 (+) |
| gba | gba | coding | upstream | 299977 | 17506575 ~ 17515027 (+) |
| dap3 | LOC106605893 | coding | upstream | 319036 | 17484825 ~ 17495968 (+) |
| rusc1 | LOC106605889 | coding | upstream | 362518 | 17426432 ~ 17452486 (+) |
| fdps | LOC106605924 | coding | upstream | 389008 | 17422056 ~ 17425996 (+) |
| LOC110536418 | LOC106575022 | coding | downstream | 200963 | 18016795 ~ 18047915 (+) |
| LOC110536431 | LOC107573682 | coding | downstream | 236673 | 18052505 ~ 18071232 (+) |
| trim108 | LOC106573777 | coding | downstream | 261139 | 18076971 ~ 18086938 (+) |
| LOC110536448 | NA | coding | downstream | 274476 | 18090308 ~ 18094143 (+) |
| LOC110536617 | NA | coding | downstream | 461829 | 18277408 ~ 18278953 (+) |
| G118009 | NA | non-coding | upstream | 2648 | 17809980 ~ 17812356 (+) |
| G117974 | LOC106609264 | non-coding | upstream | 68491 | 17745127 ~ 17746513 (+) |
| G117967 | NA | non-coding | upstream | 76298 | 17735619 ~ 17738706 (+) |
| G117964 | NA | non-coding | upstream | 83740 | 17731031 ~ 17731264 (+) |
| G117963 | NA | non-coding | upstream | 86609 | 17727664 ~ 17728395 (+) |
| G118011 | NA | non-coding | downstream | 40 | 17815872 ~ 17823926 (+) |
| G118003 | LOC106594717 | non-coding | downstream | 29977 | 17845809 ~ 17853491 (+) |
| G118045 | NA | non-coding | downstream | 71013 | 17886845 ~ 17889352 (+) |
| G118010 | NA | non-coding | downstream | 115723 | 17931555 ~ 17932511 (+) |
| G118085 | LOC100380759 | non-coding | downstream | 130381 | 17946213 ~ 17947795 (+) |
| G117735 | NA | other | upstream | 356982 | 17455765 ~ 17458022 (+) |
| LOC110520798 | fam189b | other | upstream | 393344 | 17395343 ~ 17421816 (+) |
| G117714 | LOC106605886 | other | upstream | 741303 | 17073201 ~ 17073701 (+) |
| G117704 | NA | other | upstream | 764165 | 17050132 ~ 17050839 (+) |
| LOC110536275 | s10i | other | upstream | 816643 | 16995630 ~ 16998361 (+) |
| LOC110536658 | LOC106577300 | other | downstream | 641526 | 18457284 ~ 18481741 (+) |
| G119153 | LOC106605761 | other | downstream | 818007 | 18633839 ~ 18636041 (+) |
| G119160 | NA | other | downstream | 854681 | 18670513 ~ 18672320 (+) |
| G119245 | stl2 | other | downstream | 1143304 | 18934673 ~ 18992769 (+) |
| LOC110503718 | LOC102193556 | other | downstream | 1440754 | 19131905 ~ 19259074 (+) |
