XLOC_020976 (glsa)


Basic Information

Item Value
gene id XLOC_020976
gene name glsa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 12831675 ~ 12862415 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041262
AGTAAAATAGCTGATCCACAAATTAACAGTTAGCGTAATCGAGTTACTGTCGGAAACTGTTAATTTAGCCTGTCAGGTTTGAAATGTTACACTTTAGGCTTTCGAGGGCGTTAAAGGAGATCTGCAAACCCAATGTAAGGCGCGTTTGGAGAAATAATACAGATGAAACAACGGTCGCCGGAGGACGCGCATCTTCATCCAGACGAGCTCTGTGCACGCAGACAGATGCGGCCAATGACAAGAGAAGGAAGGCAGGCATTTTGCCCAGCCTGGAAGATCTACTGTTTTACACTATCGCAGAAGGCCAGGAGAAAATTCCAGCTCACAAGTTTACCACGGCGCTGAAAGCCACAGGTCTGCGAACTGGAGACCCTCGTCTTAAGGAATGTATGGAGATGTTAAAGATCACCCTGAAAACCACTTCAGACGGTGCTCTGGATCGACATctctttaaaaaGTGTGTGCAAAGTAACATCGTGCTGCTAACTCAGGCTTTCCGGAAGAAGTTTGTCATTCCTGACTTTCAGTCGTTTACCTCTCATATTGATCAGATTTATGAGAGTGCTAAATCACTGTCAGGTGGCCAGGTAGCAGATTACATTCCTCAGCTAGCGAAATTTAGCCCTAACCTCTGGGCTGTTTCTCTCTGCACTGTAGACGGTCAAAGATACACTGCAGGCGACACTAAAGTTCCATTTTGTCTGCAGTCGTGCGTGAAACCGCTAAAATACGCAATTGCGGTTCACGATCACGGCACCGAATACGTGCACCGCTTTATAGGAAAGGAACCCAGCGGTCTTCGTTTCAACAAACTCTTCCTTAATGAAGATGATAAACCCCACAATCCCATGGTAAACGCTGGCGCTATAGTTTGTACCTCCCTACTCAAGCAAGGTGTAAGCAACGCAGAGAAGTTTGACTATGTGTTGAATTTCATGAAGAAGTTGGCAGGAAATGAATATGTTGGTTTCAGCAATGCTACTTTTCAGTCAGAGCGATTGTCAGGAGACAGAAACTTTGCCATTGGATACTACTTGAAGGAGAAGAAGTGTTTCCCAGAGGGCACCGATATGATCTCCATCCTGGACCTTTACTTTCAGCTGTGTTCCATTGAGGTGACCTGTGAAAGTGCCAGTGTTATGGCAGCAACTCTGGCGAACGGCGGCTTCTGTCCAATCACAGGCGAGCGAGTGGTCAACCCCGAGGCTGTGCGAAACACTCTGAGCCTCATGCACTCCTGCGGCATGTACGACTTCTCTGGACAGTTCGCTTTCCATGTTGGTCTGCCGGCTAAATCAGGTGTTTCTGGAGGCATCCTGCTGGTCGTGCCCAACGTGATGGGAATCATGTGCTGGTCTCCACCTCTTGACAAACTGGGCAACAGCGTGAGGGGAATCCAGTTTTGCACGGATCTGGTCCAACTGTTTAATTTCCACAACTATGACAATTTGCGGCACTTTGCCAAGAAACTGGATCCACGCAGAGAGGGCGGAGACCAACGGGTCAAGTCTGTCATCAACTTGCTGTTTGCGGCCTACACAGGGGACGTGTCTGCTTTGAGAAGGTTTGCCTTGTCATCGATGGATATGGAGCAGAGAGATTATGACTCGAGAACTGCTCTTCATGTAGCTGCTGCTGAAGGCCATGCTGAGGTTGTGCGTTTTCTGCTAGAAGCCTGTAAAGTGAATCCAGTGCCCAAGGACAGGTGGGGAAACACTCCGATGGATGAAGCCATTCATTTTGGCCATCACGATGTGGTAACAATCCTGCAGGACTATCACAACACCTACAGCCCGAAGGAGAGCAGCGCCGACAGCGAAAAAGAGACGGCAGAGAAAAACCTTGACGGGATGCTGTAG
>TCONS_00041263
AGTAAAATAGCTGATCCACAAATTAACAGTTAGCGTAATCGAGTTACTGTCGGAAACTGTTAATTTAGCCTGTCAGGTTTGAAATGTTACACTTTAGGCTTTCGAGGGCGTTAAAGGAGATCTGCAAACCCAATGTAAGGCGCGTTTGGAGAAATAATACAGATGAAACAACGGTCGCCGGAGGACGCGCATCTTCATCCAGACGAGCTCTGTGCACGCAGACAGATGCGGCCAATGACAAGAGAAGGAAGGCAGGCATTTTGCCCAGCCTGGAAGATCTACTGTTTTACACTATCGCAGAAGGCCAGGAGAAAATTCCAGCTCACAAGTTTACCACGGCGCTGAAAGCCACAGGTCTGCGAACTGGAGACCCTCGTCTTAAGGAATGTATGGAGATGTTAAAGATCACCCTGAAAACCACTTCAGACGGTGCTCTGGATCGACATctctttaaaaaGTGTGTGCAAAGTAACATCGTGCTGCTAACTCAGGCTTTCCGGAAGAAGTTTGTCATTCCTGACTTTCAGTCGTTTACCTCTCATATTGATCAGATTTATGAGAGTGCTAAATCACTGTCAGGTGGCCAGGTAGCAGATTACATTCCTCAGCTAGCGAAATTTAGCCCTAACCTCTGGGCTGTTTCTCTCTGCACTGTAGACGGTCAAAGATACACTGCAGGCGACACTAAAGTTCCATTTTGTCTGCAGTCGTGCGTGAAACCGCTAAAATACGCAATTGCGGTTCACGATCACGGCACCGAATACGTGCACCGCTTTATAGGAAAGGAACCCAGCGGTCTTCGTTTCAACAAACTCTTCCTTAATGAAGATGATAAACCCCACAATCCCATGGTAAACGCTGGCGCTATAGTTTGTACCTCCCTACTCAAGATTAAGGTTATGAATAATCACGTTGAAAGGATTATATTGAAGAGGGAAACGGAAGTGGGATGGGGCAGAAACATGAGAGAAAAAGAG

Function

symbol description
glsa Predicted to enable glutaminase activity. Predicted to be involved in glutamate biosynthetic process and glutamine catabolic process. Predicted to act upstream of or within glutamine metabolic process. Is expressed in brain; pectoral fin; and swim bladder. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 71. Orthologous to human GLS (glutaminase).

GO:

id name namespace
GO:0006537 glutamate biosynthetic process biological_process
GO:0006541 glutamine metabolic process biological_process
GO:0006543 glutamine catabolic process biological_process
GO:0004359 glutaminase activity molecular_function

KEGG:

id description
ko00250 Alanine, aspartate and glutamate metabolism
ko00220 Arginine biosynthesis
ko00471 D-Glutamine and D-glutamate metabolism
ko02020 Two-component system
ko04964 Proximal tubule bicarbonate reclamation
ko04724 Glutamatergic synapse
ko04727 GABAergic synapse
ko05206 MicroRNAs in cancer
ko05230 Central carbon metabolism in cancer

ZFIN:

id description
ZDB-GENE-050204-3 Predicted to enable glutaminase activity. Predicted to be involved in glutamate biosynthetic process and glutamine catabolic process. Predicted to act upstream of or within glutamine metabolic process. Is expressed in brain; pectoral fin; and swim bladder. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 71. Orthologous to human GLS (glutaminase).

Ensembl:

ensembl_id ENSDARG00000062812

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041262 False 1859 mRNA 0.48 18 12831675 12862415
TCONS_00041263 True 977 mRNA 0.46 8 12846949 12862415

Neighbor

gene id symbol gene type direction distance location
XLOC_020975 NA coding downstream 45234 12777889 ~ 12786441 (-)
XLOC_020974 cnot9 coding downstream 68325 12752286 ~ 12763350 (-)
XLOC_020973 plcd4a coding downstream 85136 12729329 ~ 12746539 (-)
XLOC_020972 CR847870.3 coding downstream 105119 12699121 ~ 12726556 (-)
XLOC_020971 adarb1a coding downstream 137838 12641580 ~ 12693837 (-)
XLOC_020977 nab1a coding upstream 7860 12870275 ~ 12890921 (-)
XLOC_020978 mfsd6a coding upstream 48821 12911236 ~ 12925741 (-)
XLOC_020979 NA coding upstream 70875 12933290 ~ 12940709 (-)
XLOC_020980 NA coding upstream 87405 12949820 ~ 12950292 (-)
XLOC_020981 NA coding upstream 95807 12958222 ~ 12964877 (-)
XLOC_020969 CR847870.5 non-coding downstream 246721 12584839 ~ 12584954 (-)
XLOC_020962 NA non-coding downstream 1133000 11697272 ~ 11698675 (-)
XLOC_020961 NA non-coding downstream 1157254 11672189 ~ 11674421 (-)
XLOC_020984 BX908726.1 non-coding upstream 239321 13101736 ~ 13112322 (-)
XLOC_020985 NA non-coding upstream 325446 13187861 ~ 13188332 (-)

Expression


Co-expression Network