G118722


Basic Information

Item Value
gene id G118722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17864354 ~ 17876646 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136819
aaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgcagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcaggaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagttcaattttggtttcatctgaccagagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136819 True 459 lncRNA 0.37 2 17864354 17876646

Neighbor

gene id symbol gene type direction distance location
LOC110519442 LOC105018974 coding downstream 55823 17733938 ~ 17808531 (-)
LOC110536315 LOC105018975 coding downstream 142243 17685997 ~ 17722111 (-)
arnt arnt coding downstream 182646 17667882 ~ 17681708 (-)
LOC110536309 LOC106574682 coding downstream 197687 17663193 ~ 17666667 (-)
crabp2a LOC106605806 coding downstream 227586 17624134 ~ 17636768 (-)
tars2 LOC100380759 coding upstream 54586 17931232 ~ 17947821 (-)
LOC110536358 LOC106605802 coding upstream 75735 17952381 ~ 17966181 (-)
LOC110536367 prpf3 coding upstream 89755 17966401 ~ 17977045 (-)
LOC110536375 LOC106575046 coding upstream 122785 17999431 ~ 18009077 (-)
LOC118936999 LOC106605786 coding upstream 218978 18095624 ~ 18099207 (-)
G118688 NA non-coding downstream 57900 17803916 ~ 17806454 (-)
G118689 NA non-coding downstream 58822 17804629 ~ 17805532 (-)
G118683 NA non-coding downstream 76720 17785914 ~ 17787634 (-)
G118679 NA non-coding downstream 85777 17776126 ~ 17778577 (-)
G118664 NA non-coding downstream 119910 17743969 ~ 17744444 (-)
G118741 NA non-coding upstream 25965 17902611 ~ 17903908 (-)
G118746 NA non-coding upstream 45428 17922074 ~ 17922290 (-)
G118747 NA non-coding upstream 48488 17925134 ~ 17925378 (-)
G118751 NA non-coding upstream 53667 17930313 ~ 17930529 (-)
G118699 NA non-coding upstream 102596 17979242 ~ 17982144 (-)
G118606 NA other downstream 154331 17682022 ~ 17710023 (-)
LOC110520799 ash1l other downstream 380103 17455727 ~ 17484284 (-)
G118494 NA other downstream 532326 17331115 ~ 17332028 (-)
G118456 LOC100380853 other downstream 612078 17244124 ~ 17252276 (-)
LOC118938160 LOC106574957 other upstream 32847 17809976 ~ 17919784 (-)
LOC110536462 LOC108436080 other upstream 255828 18127347 ~ 18153075 (-)
LOC110534274 LOC105018985 other upstream 285663 18157725 ~ 18188504 (-)
khdc4 LOC106573819 other upstream 391902 18268546 ~ 18277594 (-)

Expression


Co-expression Network