G118726


Basic Information

Item Value
gene id G118726
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17871564 ~ 17872514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136827
gatgtgctcaacacaaaacactgaatatcccagcagtaggtttatgatgtgctcaacacaaaacactgaatatcccagcagtaggtttatgatgtgctcaacacaaaacactatgaatatcccagcagtaggtttatgatgtgctcaacacaaaacactgaatatcccagcagtaggtttatgatgtgctcaacacaaaacactatgaatatcccagcagtaggtttatgatgtgttcaacacaaaacactatgaatatcccagcagtaggtttatgatgtgctcaacacaaaacactgaatatcccagcagtaggtttatgatgtgttcaacacaaaacactatgaatatcccagcagtaggtttatgatgtgttcaacacaaaacactatgaatatcccagcagtatgtttatgatgtgttcaacacaaaacactgaatatcccagcagtagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136827 True 455 lncRNA 0.52 3 17871564 17872514

Neighbor

gene id symbol gene type direction distance location
LOC110519442 LOC105018974 coding downstream 63033 17733938 ~ 17808531 (-)
LOC110536315 LOC105018975 coding downstream 149453 17685997 ~ 17722111 (-)
arnt arnt coding downstream 189856 17667882 ~ 17681708 (-)
LOC110536309 LOC106574682 coding downstream 204897 17663193 ~ 17666667 (-)
crabp2a LOC106605806 coding downstream 234796 17624134 ~ 17636768 (-)
tars2 LOC100380759 coding upstream 58718 17931232 ~ 17947821 (-)
LOC110536358 LOC106605802 coding upstream 79867 17952381 ~ 17966181 (-)
LOC110536367 prpf3 coding upstream 93887 17966401 ~ 17977045 (-)
LOC110536375 LOC106575046 coding upstream 126917 17999431 ~ 18009077 (-)
LOC118936999 LOC106605786 coding upstream 223110 18095624 ~ 18099207 (-)
G118688 NA non-coding downstream 65110 17803916 ~ 17806454 (-)
G118689 NA non-coding downstream 66032 17804629 ~ 17805532 (-)
G118683 NA non-coding downstream 83930 17785914 ~ 17787634 (-)
G118679 NA non-coding downstream 92987 17776126 ~ 17778577 (-)
G118664 NA non-coding downstream 127120 17743969 ~ 17744444 (-)
G118741 NA non-coding upstream 30097 17902611 ~ 17903908 (-)
G118746 NA non-coding upstream 49560 17922074 ~ 17922290 (-)
G118747 NA non-coding upstream 52620 17925134 ~ 17925378 (-)
G118751 NA non-coding upstream 57799 17930313 ~ 17930529 (-)
G118699 NA non-coding upstream 106728 17979242 ~ 17982144 (-)
G118606 NA other downstream 161541 17682022 ~ 17710023 (-)
LOC110520799 ash1l other downstream 387313 17455727 ~ 17484284 (-)
G118494 NA other downstream 539536 17331115 ~ 17332028 (-)
G118456 LOC100380853 other downstream 619288 17244124 ~ 17252276 (-)
LOC118938160 LOC106574957 other upstream 36979 17809976 ~ 17919784 (-)
LOC110536462 LOC108436080 other upstream 259960 18127347 ~ 18153075 (-)
LOC110534274 LOC105018985 other upstream 289795 18157725 ~ 18188504 (-)
khdc4 LOC106573819 other upstream 396034 18268546 ~ 18277594 (-)

Expression


Co-expression Network