G118699


Basic Information

Item Value
gene id G118699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 17979242 ~ 17982144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU136793
acccacacacacacacacacttacttgcACTTGCACTCACCCAAATCCTCCAGGGCTGAATGCTGACTAGTCTCAAAACAATGTTCATCTGTATTAAACATGCACACTACCAATAGGGGGCATAGAGTTAACCATCACTACACTAGTCCTGCCTATGAACTGCAATAACAAGAGAGGGAATAGAGTTAACCTCCACACTACTGAACCTACTGTTTAAGGGATATATAGATAAACATTTTAAAGGATTTAAATATTTAGATAGCAGACATATCAAATTTGTCCTTGATTGGTGGCCATTATGATGTCATCAGCAGGGGGCAGACTAAAATACATGATGTGGACCATATTTTCAAGGACACAGAAGTCTCTCATAACACAATGTGGGGATATTTAGGGAAGAGTCATGCTACGATCCTCATGGTGACACCATCTTACATGACTTCTCAATTATTGAAgcagagtgactgaatgagagacaaagagaaaaaggtgggatgagagagagagaaattgtgaAAGGGTGAAAGCAGGATGGTGAAAGAGGTATAATGCTTGCTTCTGCTGAGTATGTAAATGAGGGTTATTTTGCATGTACCTTGACAAcccacacgcatgcacacgcatgcacacacaccctgagGACTGGTACACTCTGCCCATCTGTGTGTGTATTAGGGGCCGTGGCTCAGTGCTGTGGCATGCAGCTCAGTTTGGTGtgaagtgaacacacacacacacacacacagggtttggAGAAGTGTATACAGCAGCGTGACCCAGAGTCCCCTGGTACCGGAACCTTCTAGAATGATTTAGAGCCACTGTCAGACACACAGGACTACAACTGGGTTAGAATGATGAAACGCCACCTGATCTGCTGGGCTGGGGAATCACatagtttgatgccattccattgtgtatgtgtgccattcagagggtgaacaggcaagacaaaagatttaagtgcctttgaacggggtatggtagtaggtgccaggcgcaccggtttgttccaagaactgcaacgttgctggggttttcacgctcaacagcttcccgtgtgtatcaagaatggtccaccacccaaaggacatctagccaacttgagaCAATTGTGGGAAgtattgtagtcaacatgggccagcatccctgtgcaactcaatattaggtaaaTACtactaatgtttggtatactcagtttaTGTGCCCTTCAAATGAAAACATTATAGAATAAAACACAACACTGACAGTAATGTTATCTGATGAATAAGGATGAAGCTTTTTCTCAAACCAGACCAAAGGATAGAGGTTGCATTCATACACAGCCCCTCCATTCAACCAGCGACCACAAAATAGTGCCATGTACTGCGGGTGCTACTGAGTACTATGAAGACACCATtgatagtctgtgtgtgtgtgttttgtggtggGGGGGTCGGGGTCGAGTGTGGATGGGGTGAGGGTATTTGTGATattgtgtgcgtgagtgagtgtgtggggaGAGGGGTTGAGGGGTCTGTGTGCGGTACAGTCACATTGTGCCATGATGCTGTTATATAATGGGCTGGCTAGTGGGATGTCAGACAGacatctcagacagagttcagtgtgtcaaatcggagggcctgttgtccggacctctggcagtctctatggaggtgccacagggttcaattctcaggctgactcttttctctgtatacatcaatgatgtcgctctttctgctgatgattctctgatccacttctatgcagacgacaccactctgtatacttctggcccttctttggacaatgtgttaactaacctccagacgagcttcaatgccatacaactctccttccgtggcctcccaactgctcttaaatgcaagtaaaactaaatgcatgctcttcaaccgatcgctgcccgcacctgcccgcccgtccagcatcactactctggacggttctgacttagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaagcatctccaatccaacattaaatctagaatcagcttcctatttcgcaaacaaagcatccttcactcatgctgccaaacataccctcggaAAACTGactcctgccgatccttgactttggcgaagtaatttacaaaatagcctccaacactctactcagaaaattggatgcagtctatcacagtgccatcagttttgtcaccaaagcccatatactacccaccactgcgacctgtatgctctcgttggctggccctcgcttcatattcgtcgccagacccactggctccaggtcatctataagtatttgcttggtaaagccctgccttatctcagctcactggtcaccatagcagcacccacctgtagcatgtgctccagcaggtatatttcactggtcaccccaaagccAATCCCTCCTTTGgctgtctttccttccagttctctgctgccaatgactggaactaattgcaaaaatcactgaagctggagacccatatctccctcactaactttaagcactagctgtcagagcagctcacagatcactgcacctgtacatagcccacctgtaaatagcccatccaactacctcatccccatactgttatttattgttttgctcctttgcaccccagtatctctacttgcacattcatcttctgcacatctatcactccagtgtttaattgctaaattgtaattattttgtcactatggcctatttattaccttacctcccttattttacctaatttgcacacactgtatgtagacttttttttctctattgtgttattgactgtatgtttgtttattccatgtgtaactctgtgttgttgtttgtgtcacactgctttgcttaatcttggcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136793 True 2903 lncRNA 0.41 1 17979242 17982144

Neighbor

gene id symbol gene type direction distance location
LOC110536367 prpf3 coding downstream 2197 17966401 ~ 17977045 (-)
LOC110536358 LOC106605802 coding downstream 13061 17952381 ~ 17966181 (-)
tars2 LOC100380759 coding downstream 31421 17931232 ~ 17947821 (-)
LOC118938160 LOC106574957 coding downstream 59458 17809976 ~ 17919784 (-)
LOC110519442 LOC105018974 coding downstream 170711 17733938 ~ 17808531 (-)
LOC110536375 LOC106575046 coding upstream 17287 17999431 ~ 18009077 (-)
LOC118936999 LOC106605786 coding upstream 113480 18095624 ~ 18099207 (-)
LOC118944060 LOC105018963 coding upstream 117227 18099371 ~ 18102318 (-)
LOC110536479 LOC106605789 coding upstream 137928 18120072 ~ 18127143 (-)
LOC110536462 LOC108436080 coding upstream 145203 18127347 ~ 18153075 (-)
G118751 NA non-coding downstream 48713 17930313 ~ 17930529 (-)
G118747 NA non-coding downstream 53864 17925134 ~ 17925378 (-)
G118746 NA non-coding downstream 56952 17922074 ~ 17922290 (-)
G118741 NA non-coding downstream 75334 17902611 ~ 17903908 (-)
G118723 NA non-coding downstream 79271 17868555 ~ 17899971 (-)
G118760 NA non-coding upstream 479 17982623 ~ 17983119 (-)
G118762 NA non-coding upstream 2758 17984902 ~ 17985117 (-)
G118767 NA non-coding upstream 34620 18016764 ~ 18017600 (-)
G118779 NA non-coding upstream 61204 18043348 ~ 18044371 (-)
G118765 NA non-coding upstream 65414 18047558 ~ 18047901 (-)
G118606 NA other downstream 269219 17682022 ~ 17710023 (-)
LOC110536309 LOC106574682 other downstream 312676 17663193 ~ 17666667 (-)
LOC110520799 ash1l other downstream 494991 17455727 ~ 17484284 (-)
G118494 NA other downstream 647214 17331115 ~ 17332028 (-)
LOC110534274 LOC105018985 other upstream 180165 18157725 ~ 18188504 (-)
khdc4 LOC106573819 other upstream 286404 18268546 ~ 18277594 (-)
G119000 NA other upstream 445418 18427562 ~ 18433668 (-)

Expression


Co-expression Network