G118109


Basic Information

Item Value
gene id G118109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18005044 ~ 18005347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU135986
gaatgaagagagagggacgagagaatgaagagatagagggaggagagaatggagagatggagagatgaggagagaatggagagatagagaatggagagatagagagagaggagagaatggagagatagagggaggagagaatggagagatagagagaggaagattaTAAGGCTTAGAAAACAACCCTTCTAAGAATAGCATGGACATTAACTTTCCTGTTCTCATCTACTAAACACAGATCCAGACTAAATCCACTTCTCTCTCTAAACATTCAAACTGGACTACTTATTATGAAATCTCTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135986 True 304 lncRNA 0.41 1 18005044 18005347

Neighbor

gene id symbol gene type direction distance location
polr3c LOC106605790 coding upstream 472807 17523084 ~ 17532237 (+)
gba gba coding upstream 490017 17506575 ~ 17515027 (+)
dap3 LOC106605893 coding upstream 509076 17484825 ~ 17495968 (+)
rusc1 LOC106605889 coding upstream 552558 17426432 ~ 17452486 (+)
fdps LOC106605924 coding upstream 579048 17422056 ~ 17425996 (+)
LOC110536418 LOC106575022 coding downstream 11448 18016795 ~ 18047915 (+)
LOC110536431 LOC107573682 coding downstream 47158 18052505 ~ 18071232 (+)
trim108 LOC106573777 coding downstream 71624 18076971 ~ 18086938 (+)
LOC110536448 NA coding downstream 84961 18090308 ~ 18094143 (+)
LOC110536617 NA coding downstream 272314 18277408 ~ 18278953 (+)
G118108 LOC106575046 non-coding upstream 542 17999528 ~ 18004502 (+)
G118107 NA non-coding upstream 5929 17998454 ~ 17999115 (+)
G118106 NA non-coding upstream 18706 17986106 ~ 17986338 (+)
G118105 NA non-coding upstream 21842 17982543 ~ 17983202 (+)
G118082 NA non-coding upstream 51750 17952310 ~ 17953294 (+)
G118122 NA non-coding downstream 23269 18028616 ~ 18029709 (+)
G118123 NA non-coding downstream 24496 18029843 ~ 18036218 (+)
G118124 NA non-coding downstream 29039 18034386 ~ 18034961 (+)
G117735 NA other upstream 547022 17455765 ~ 17458022 (+)
LOC110520798 fam189b other upstream 583384 17395343 ~ 17421816 (+)
G117714 LOC106605886 other upstream 931343 17073201 ~ 17073701 (+)
G117704 NA other upstream 954205 17050132 ~ 17050839 (+)
LOC110536275 s10i other upstream 1006683 16995630 ~ 16998361 (+)
LOC110536658 LOC106577300 other downstream 452011 18457284 ~ 18481741 (+)
G119153 LOC106605761 other downstream 628492 18633839 ~ 18636041 (+)
G119160 NA other downstream 665166 18670513 ~ 18672320 (+)
G119245 stl2 other downstream 953789 18934673 ~ 18992769 (+)
LOC110503718 LOC102193556 other downstream 1251239 19131905 ~ 19259074 (+)

Expression


Co-expression Network