Gene
RNA
| Item | Value |
|---|---|
| gene id | G118161 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 18127656 ~ 18127977 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU136057 | True | 322 | lncRNA | 0.38 | 1 | 18127656 | 18127977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536448 | NA | coding | upstream | 33513 | 18090308 ~ 18094143 (+) |
| trim108 | LOC106573777 | coding | upstream | 40718 | 18076971 ~ 18086938 (+) |
| LOC110536431 | LOC107573682 | coding | upstream | 56424 | 18052505 ~ 18071232 (+) |
| LOC110536418 | LOC106575022 | coding | upstream | 79741 | 18016795 ~ 18047915 (+) |
| polr3c | LOC106605790 | coding | upstream | 595419 | 17523084 ~ 17532237 (+) |
| LOC110536617 | NA | coding | downstream | 149684 | 18277408 ~ 18278953 (+) |
| LOC110536604 | LOC106574921 | coding | downstream | 176509 | 18304486 ~ 18343804 (+) |
| LOC110534321 | LOC105018956 | coding | downstream | 221774 | 18349751 ~ 18433698 (+) |
| si:ch211-120k19.1 | LOC106605747 | coding | downstream | 309096 | 18437073 ~ 18439582 (+) |
| LOC110536674 | rpl18 | coding | downstream | 318103 | 18446080 ~ 18456914 (+) |
| G118123 | NA | non-coding | upstream | 91438 | 18029843 ~ 18036218 (+) |
| G118124 | NA | non-coding | upstream | 92695 | 18034386 ~ 18034961 (+) |
| G118122 | NA | non-coding | upstream | 97947 | 18028616 ~ 18029709 (+) |
| G118179 | NA | non-coding | downstream | 27298 | 18155275 ~ 18155514 (+) |
| G118221 | LOC106594169 | non-coding | downstream | 121733 | 18249710 ~ 18251198 (+) |
| G118222 | NA | non-coding | downstream | 123245 | 18251222 ~ 18251806 (+) |
| G118223 | NA | non-coding | downstream | 126454 | 18254431 ~ 18255774 (+) |
| G118224 | NA | non-coding | downstream | 127860 | 18255837 ~ 18257167 (+) |
| G117735 | NA | other | upstream | 669634 | 17455765 ~ 17458022 (+) |
| LOC110520798 | fam189b | other | upstream | 705996 | 17395343 ~ 17421816 (+) |
| G117714 | LOC106605886 | other | upstream | 1053955 | 17073201 ~ 17073701 (+) |
| G117704 | NA | other | upstream | 1076817 | 17050132 ~ 17050839 (+) |
| LOC110536275 | s10i | other | upstream | 1129295 | 16995630 ~ 16998361 (+) |
| LOC110536658 | LOC106577300 | other | downstream | 329381 | 18457284 ~ 18481741 (+) |
| G119153 | LOC106605761 | other | downstream | 505862 | 18633839 ~ 18636041 (+) |
| G119160 | NA | other | downstream | 542536 | 18670513 ~ 18672320 (+) |
| G119245 | stl2 | other | downstream | 831159 | 18934673 ~ 18992769 (+) |
| LOC110503718 | LOC102193556 | other | downstream | 1128609 | 19131905 ~ 19259074 (+) |
