G119100


Basic Information

Item Value
gene id G119100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18493276 ~ 18494523 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137335
TCTCAGTTCACTTTTTATTGTTTCACAACAGTTGACTGGCACCCGTGTACCGTGGTTTTGTTTTTGCTACATATAGCACAGATGACCTATCCATCTTTACATTgctgtaaaacaaaaataaataataaatcaaaCACTATCCCAggaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtgatgttggggtctgggggacagaagtagtggtggtggggtctgggggacagaagtagtggtggtggggtctgggggacag

Function

NR:

description
Small nuclear ribonucleoprotein Sm D3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137335 True 1248 lncRNA 0.52 1 18493276 18494523

Neighbor

gene id symbol gene type direction distance location
LOC110536509 LOC106593149 coding downstream 200500 18288741 ~ 18292776 (-)
khdc4 LOC106573819 coding downstream 215682 18268546 ~ 18277594 (-)
LOC110536568 LOC106573533 coding downstream 227490 18256000 ~ 18265786 (-)
LOC118938207 LOC106594169 coding downstream 242594 18249720 ~ 18250682 (-)
LOC110534298 cyp11b coding downstream 244534 18224491 ~ 18248742 (-)
LOC110536706 LOC106577267 coding upstream 5276 18496988 ~ 18516011 (-)
LOC110536756 ndufa3 coding upstream 46527 18541050 ~ 18543176 (-)
LOC110536762 prpf31 coding upstream 65270 18559793 ~ 18564193 (-)
LOC110536757 lmtk3 coding upstream 70080 18564603 ~ 18586875 (-)
LOC110536773 LOC106577219 coding upstream 92496 18587019 ~ 18590352 (-)
G119090 NA non-coding downstream 8422 18484645 ~ 18484854 (-)
G119089 NA non-coding downstream 9584 18483143 ~ 18483692 (-)
G119085 NA non-coding downstream 24264 18466302 ~ 18469012 (-)
G119079 rpl18 non-coding downstream 36362 18446152 ~ 18456914 (-)
G119000 NA non-coding downstream 59608 18427562 ~ 18433668 (-)
G119126 NA non-coding upstream 41489 18536012 ~ 18538646 (-)
G119137 NA non-coding upstream 89339 18583862 ~ 18584065 (-)
G119148 NA non-coding upstream 105672 18600195 ~ 18600493 (-)
G119087 LOC106605728 other downstream 16523 18476454 ~ 18476753 (-)
LOC110534274 LOC105018985 other downstream 328163 18157725 ~ 18188504 (-)
LOC110536462 LOC108436080 other downstream 340490 18127347 ~ 18153075 (-)
LOC110534340 LOC106605761 other upstream 143358 18627912 ~ 18646884 (-)
G119512 LOC105019016 other upstream 304977 18799500 ~ 18801387 (-)
G119663 NA other upstream 553784 19048307 ~ 19049030 (-)
cacng6b LOC106606119 other upstream 989814 19484328 ~ 19499142 (-)

Expression


Co-expression Network