Gene
RNA
| Item | Value |
|---|---|
| gene id | G119016 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 18541014 ~ 18561243 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU137227 | True | 512 | lncRNA | 0.32 | 2 | 18541014 | 18561243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536732 | LOC106577252 | coding | upstream | 2308 | 18524288 ~ 18538706 (+) |
| LOC110536690 | LOC106577286 | coding | upstream | 47961 | 18485082 ~ 18493053 (+) |
| LOC110536658 | LOC106577300 | coding | upstream | 62242 | 18457284 ~ 18481741 (+) |
| LOC110536674 | rpl18 | coding | upstream | 84100 | 18446080 ~ 18456914 (+) |
| si:ch211-120k19.1 | LOC106605747 | coding | upstream | 101432 | 18437073 ~ 18439582 (+) |
| LOC110536807 | LOC106577172 | coding | downstream | 44831 | 18606074 ~ 18621580 (+) |
| cdc42ep5 | LOC106605762 | coding | downstream | 91717 | 18652960 ~ 18657794 (+) |
| leng9 | LOC106605766 | coding | downstream | 146392 | 18707635 ~ 18720399 (+) |
| ttyh1 | LOC106592928 | coding | downstream | 160172 | 18721415 ~ 18755200 (+) |
| ube2s | ube2s | coding | downstream | 199600 | 18760843 ~ 18767906 (+) |
| G119054 | NA | non-coding | upstream | 784 | 18539596 ~ 18540230 (+) |
| G119053 | NA | non-coding | upstream | 1808 | 18539007 ~ 18539206 (+) |
| G119026 | NA | non-coding | upstream | 57764 | 18482810 ~ 18483250 (+) |
| LOC110534321 | LOC105018956 | non-coding | upstream | 107316 | 18349751 ~ 18433698 (+) |
| G119064 | NA | non-coding | downstream | 16066 | 18577309 ~ 18577580 (+) |
| G119065 | NA | non-coding | downstream | 17477 | 18578720 ~ 18579099 (+) |
| G119066 | NA | non-coding | downstream | 18961 | 18580204 ~ 18580412 (+) |
| G119071 | NA | non-coding | downstream | 24633 | 18585876 ~ 18586079 (+) |
| G119076 | NA | non-coding | downstream | 31268 | 18592511 ~ 18592815 (+) |
| G117735 | NA | other | upstream | 1082992 | 17455765 ~ 17458022 (+) |
| LOC110520798 | fam189b | other | upstream | 1119354 | 17395343 ~ 17421816 (+) |
| G117714 | LOC106605886 | other | upstream | 1467313 | 17073201 ~ 17073701 (+) |
| G117704 | NA | other | upstream | 1490175 | 17050132 ~ 17050839 (+) |
| G119153 | LOC106605761 | other | downstream | 72596 | 18633839 ~ 18636041 (+) |
| G119160 | NA | other | downstream | 109270 | 18670513 ~ 18672320 (+) |
| G119245 | stl2 | other | downstream | 397893 | 18934673 ~ 18992769 (+) |
| LOC110503718 | LOC102193556 | other | downstream | 695343 | 19131905 ~ 19259074 (+) |
| G119794 | u2af2 | other | downstream | 945408 | 19506651 ~ 19507338 (+) |
