G119458


Basic Information

Item Value
gene id G119458
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18626958 ~ 18627700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137805
gcattttatttttttgaatccGAACTGAGAGACAGCGATGGACAATCATTACAGGGACAGTTCAGTGAGTTGATTGACGTCAAAATCCTGAAATTCTGGCTTTCATGTCACTGATTAACATTATTGCACTGTTTCTAGGGATTGGCACTGAACTTAAATTCAAGGAACAATATTAAATGTCAACAATGGCCgaagtaaaaaaattaaaataaatagctCCGTTTGACCAGAGAGCAGTTGGAAAAGGCATGCAAAATAAGGAAGAGGAAATTGAGTAGGCTGATAGCTATAGGGTGAAGAAGCAACAAGCACTAAAGCTACAAGCCAAGGAATAGCTAACTACTAAAAGATGAAAGCAGTTTTTCAgagggaaagaggacctaaagagggggatgagaagagaggactagagaggagcagagggaaagagaaggacctacagtgccttgcgaaagtattcggcccccttgaactttgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137805 True 479 lncRNA 0.41 2 18626958 18627700

Neighbor

gene id symbol gene type direction distance location
LOC110536796 rps9 coding downstream 21317 18603045 ~ 18605641 (-)
LOC110536773 LOC106577219 coding downstream 36606 18587019 ~ 18590352 (-)
LOC110536757 lmtk3 coding downstream 40083 18564603 ~ 18586875 (-)
LOC110536762 prpf31 coding downstream 62765 18559793 ~ 18564193 (-)
LOC110536756 ndufa3 coding downstream 84335 18541050 ~ 18543176 (-)
LOC110534340 LOC106605761 coding upstream 2295 18627912 ~ 18646884 (-)
grwd1 grwd1 coding upstream 34904 18662604 ~ 18672410 (-)
LOC110536908 LOC106605765 coding upstream 61248 18688948 ~ 18693820 (-)
LOC110536927 LOC106577129 coding upstream 68133 18695833 ~ 18708631 (-)
josd2 josd2 coding upstream 127591 18755291 ~ 18757796 (-)
G119448 NA non-coding downstream 24273 18602471 ~ 18602685 (-)
G119447 NA non-coding downstream 24609 18601933 ~ 18602349 (-)
G119148 NA non-coding downstream 26465 18600195 ~ 18600493 (-)
G119137 NA non-coding downstream 42893 18583862 ~ 18584065 (-)
G119499 NA non-coding upstream 56966 18684666 ~ 18684901 (-)
G119532 ube2s non-coding upstream 137884 18765584 ~ 18767871 (-)
G119536 NA non-coding upstream 141078 18768778 ~ 18769085 (-)
G119087 LOC106605728 other downstream 150205 18476454 ~ 18476753 (-)
G119000 NA other downstream 193290 18427562 ~ 18433668 (-)
khdc4 LOC106573819 other downstream 354851 18268546 ~ 18277594 (-)
LOC110534274 LOC105018985 other downstream 461845 18157725 ~ 18188504 (-)
G119512 LOC105019016 other upstream 171800 18799500 ~ 18801387 (-)
G119663 NA other upstream 420607 19048307 ~ 19049030 (-)
cacng6b LOC106606119 other upstream 856637 19484328 ~ 19499142 (-)
LOC118944062 LOC106575151 other upstream 1065989 19692971 ~ 19695564 (-)

Expression


Co-expression Network