G119512 (LOC105019016)


Basic Information

Item Value
gene id G119512
gene name LOC105019016
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 18799500 ~ 18801387 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137868
GCTAGCATTGGGGTTCCCACTACTGTGGccgctgctgctgttactgccGCCATCTGACTTCCTCTGTGGCAGGTAGCCAGCCATCGCTTTCTtccttctactgctgctgcttccGCCCCCACTGCTGTCCCCCTTGCCGTCATCCTTGGAGAGGGACAGATGAAGCGGCAGGGGGAGCGGCAGGCCTGCTTCCTGCTGCATCAGAGAGGCCAGCTGGTTGGAGGAGAGCACTGGGATGCCCTGGAAGTCGGTGTAGGGGGTGGTGAGGGTGGGAGTGCGAGTGGGGGTGGGACAGGGTATGGGGAggcagctgctgctgctgtggaGGCTGCTGTTGCTGTGGCTGAGCGGTAGAGAGGGAATGCGAATGAGAGGAATGCAGAGCTGGAGGCGGAGCAAGGCCTGAGCTGGATCCCTCACTCTGACCTAAACCTATCCCCAGGTGGTTGTGGGTTCCCTGTTGAACCAGAAACTGCTCTAAGCTAGTGTTAGCAGGCACCCCAGAGAGAAAGTACTGATTAGCAGCTAGCATGCAACTGAACTGCTGATGAAGACTCCGTGCATCAGACTGGGCCCCAACCAGCTGGTGTCCCAGAGAGGTGACTGTACTGCTACTGGGGGGATTGTTAGTTACCACTGAACTggatggggagggggaagaggatgAAGGGCCAGGTGATGCTTGGGGGACAGAGAGGCCTGGATGCagagggggtggtggagggggggcAACTCCCAATCCCCCAGCACCCCCACTACTGCTACCCCCAGAAAAGTGCTCGAAGCGGCCGACCCCAGAATGCAGTTGCTCCTGTGCCAGAGCTGCCTCTGTCGGGTGGAAGGAACGCAGGAACTGTGGGTAGCCCGACACATGGCTTGAGCTGCTGCTACTCATCTTGCTTGACTTGGATCTTGAGCTTTGTGAGGACGAAGAAGGTTGTTGttgtagagggggaggaggggcgcTCATTTTGGCAAAAATAGAGGCAGAATCGGAAAAGGCGTTGCTTCTGGCCCCTTGGAGGGACCCAAGGCCTAGCCCAGACAGGAGAGCTCCTGAGGTCTCGgcctgctgttgttgttgctgctggagCTGGTGCTGGTGAAGCTGCACCTGCTGCTGATGCTGTAGCTGTCGTTCTAACCCAAGGCCTTTGAACTGATGGGCCTGGTGTCCGCTTAACATCTCTATTATGTCCAAATTGTATTTTCCAAATTGGAACATCTCCCACTCACTGGCACATGGGGGTGCAGGAGCCACACCTCCAGCACCAGGAGCAGCGACAATGATCCCACCACTGCCGCCAACGGACGAGCTTCGGCCGAGGGATCCTGCAGTGCCACTATTTGACCTGGAACTGCCTGAGTCGCCTCGGCTCGATCCCGAACTCCGCCCAATAACACTGCCGGTCCCCCCTGTTCGCGCACTTCGGCTGCTGCTACTTCCGCCCGATCGTCCACTGCCCCCACTCTCCATCCAACAGGAGAGGGAGCAAGTGTGTGGGGAATGGGGTTATTTAGTGTAAAGGGTATTTTTTCTCAAACGCAAACAGTTCTCACAGTTCTTTTCAACGTGGATACCGTATTCTCTTTTTATCTTGATGGGTTGGTGCCATTTTATTTAGTCTTAAACACTTTGTACAGTTTCATGGGGAGAAAAGGCCTTGTTTTGGTGTGcaattgttgttgtttgttggtCTCTTGGTATTTTATGGTACAGAACAATCTTTATTAGAGAGCATTTCAGTCAACAGCTGTTGGTTGGCTGTTTCAGTTACAGTGTTTCATCCATATCATCGTTTCCCTTCATCCACGTCAGTTTATTCACTCATTCTCTGGGAAGAGATGATGTTTTC

Function

NR:

description
uncharacterized protein LOC110534346, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137868 True 1856 TUCP 0.55 2 18799500 18801387

Neighbor

gene id symbol gene type direction distance location
josd2 josd2 coding downstream 41704 18755291 ~ 18757796 (-)
LOC110536927 LOC106577129 coding downstream 90869 18695833 ~ 18708631 (-)
LOC110536908 LOC106605765 coding downstream 105680 18688948 ~ 18693820 (-)
grwd1 grwd1 coding downstream 127090 18662604 ~ 18672410 (-)
LOC110534340 LOC106605761 coding downstream 152616 18627912 ~ 18646884 (-)
LOC110508916 LOC106605783 coding upstream 260707 19062094 ~ 19077953 (-)
cacng6b LOC106606119 coding upstream 682941 19484328 ~ 19499142 (-)
u2af2a u2af2 coding upstream 705281 19506668 ~ 19513981 (-)
LOC110534365 LOC106576897 coding upstream 712892 19514279 ~ 19524832 (-)
LOC110537080 LOC106576890 coding upstream 726608 19527995 ~ 19548154 (-)
G119522 NA non-coding downstream 1194 18798018 ~ 18798306 (-)
G119536 NA non-coding downstream 30415 18768778 ~ 18769085 (-)
G119532 ube2s non-coding downstream 31629 18765584 ~ 18767871 (-)
G119499 NA non-coding downstream 114599 18684666 ~ 18684901 (-)
G119541 NA non-coding upstream 14653 18816040 ~ 18818685 (-)
G119553 NA non-coding upstream 18535 18819922 ~ 18820244 (-)
G119555 NA non-coding upstream 22932 18824319 ~ 18824679 (-)
G119574 NA non-coding upstream 64769 18866156 ~ 18869534 (-)
G119576 NA non-coding upstream 72088 18873475 ~ 18875134 (-)
LOC110536756 ndufa3 other downstream 257003 18541050 ~ 18543176 (-)
G119087 LOC106605728 other downstream 322747 18476454 ~ 18476753 (-)
G119000 NA other downstream 365832 18427562 ~ 18433668 (-)
khdc4 LOC106573819 other downstream 527393 18268546 ~ 18277594 (-)
G119663 NA other upstream 246920 19048307 ~ 19049030 (-)
LOC118944062 LOC106575151 other upstream 892302 19692971 ~ 19695564 (-)
LOC110537275 grl1 other upstream 1122711 19924063 ~ 19928533 (-)
G121046 NA other upstream 1409681 20211068 ~ 20212367 (-)

Expression


Co-expression Network