XLOC_020985


Basic Information

Item Value
gene id XLOC_020985
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 13187861 ~ 13188332 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042357
CTTCCTTCACTTTAACTGTACAGAGCAGACTATTTTGCTAAATATCTGTATCATTCCATGAAAAAAAAGAGGGTGTTTATTTTCTCATCTCACGGTTTAAGCAACTGGAAACCAACGAGATGACAGAATTATCGTTTTCAGCCACGGCGATGACCTCTCGGCAGTCTCGCAGCAAGTTCACTGTGAAAACACCCAGCAGTCGCATTCACTCCCATCTGAACGAACAATGTACTTGTCAAACGCACACCTTGAGTACACAACCGATGCAGACACACTTTGTTCTAAACACACCTGGCCAAAGCGAAGAGTGACATCAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042357 True 318 lncRNA 0.44 2 13187861 13188332

Neighbor

gene id symbol gene type direction distance location
XLOC_020983 ahr2 coding downstream 22675 13046270 ~ 13165186 (-)
XLOC_020984 BX908726.1 coding downstream 75539 13101736 ~ 13112322 (-)
XLOC_020982 ahr1b coding downstream 144869 12979213 ~ 13042992 (-)
XLOC_020981 NA coding downstream 222984 12958222 ~ 12964877 (-)
XLOC_020980 NA coding downstream 237569 12949820 ~ 12950292 (-)
XLOC_020986 NA coding upstream 13146 13201478 ~ 13244551 (-)
XLOC_020987 si:ch211-227m13.1 coding upstream 88361 13276693 ~ 13350356 (-)
XLOC_020988 CU062647.1 coding upstream 234236 13422568 ~ 13431304 (-)
XLOC_020989 cntnap5b coding upstream 270403 13458735 ~ 13544244 (-)
XLOC_020990 NA coding upstream 417949 13606281 ~ 13607563 (-)
XLOC_020979 NA non-coding downstream 247152 12933290 ~ 12940709 (-)
XLOC_020975 NA non-coding downstream 401420 12777889 ~ 12786441 (-)
XLOC_020992 NA non-coding upstream 480653 13668985 ~ 13693627 (-)
XLOC_020993 CT990618.1 non-coding upstream 523102 13711434 ~ 13716585 (-)

Expression


Co-expression Network