G119398


Basic Information

Item Value
gene id G119398
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19208413 ~ 19209231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137732
tagtagagcagaaGTTGTAATGGTGGTTATGATAGTTGAGCAGAAGTTGTAGTGGTGGTTCTGAGAGAAGAGCAGTAgaagtagtggttgttatgatagtagagcagtagtggaactggttgttatgatagtagagtaaTAGTAGTTgtggttatgatagtagagcagtagtagtggttgttaagATAGTAGAACTGTAGTAGTAGTgcttgttatgatagtagagcagtagtagtggttgttatgatagtagagcagtattagtggttgttatgatagtagagcagtagttgtgttggttatgatagtagagcagtagtagtggttgttatgatagtagagcagtagtagtggttgttatgaTAGTAGAGCAGTAGTACAGGTTGTTATGATGGTAAAGCAGTAGTAGTACTGGTTGTAATGATAGAAGAGCAGTAGAAGTGGTTGTTATGGTAGTAGAACAGTactagtggttgttatgatattaGAACAGTactagtggttgttatgatagtagagcagtagtagtggtttttatgatagtagagcagaaGTTGTAATGGTGGTTATGATAGTTGAGCAGAAGTTGTAGTGGTGGTTATGAGAGAAGAGCAGTAgaagtagtggttgttatgatagtagagcagtagtggTACTGGTTGTTATGATAGAAGAGTAATAGTAGTTGTGGTTATGATAGTAaagcagtagtagtggttgttaagATAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137732 True 732 lncRNA 0.37 2 19208413 19209231
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110520830 LOC106605779 coding upstream 208203 18994838 ~ 19000210 (+)
LOC118938275 stl2 coding upstream 217046 18984795 ~ 18991367 (+)
stl2 stl2 coding upstream 230902 18971209 ~ 18977511 (+)
LOC110517769 stl2 coding upstream 247018 18956065 ~ 18961395 (+)
LOC110508936 stl2 coding upstream 256261 18946478 ~ 18952152 (+)
LOC110512786 LOC105019084 coding downstream 98345 19307576 ~ 19347300 (+)
LOC110534362 LOC106575226 coding downstream 183506 19392737 ~ 19433631 (+)
LOC110537022 LOC106576929 coding downstream 234900 19444131 ~ 19481383 (+)
LOC110537095 LOC106576906 coding downstream 316932 19526163 ~ 19528660 (+)
LOC110537107 LOC106605819 coding downstream 356648 19565879 ~ 19579511 (+)
G119387 NA non-coding upstream 13443 19194768 ~ 19194970 (+)
G119386 NA non-coding upstream 14179 19193249 ~ 19194234 (+)
G119377 NA non-coding upstream 35732 19172470 ~ 19172681 (+)
G119375 NA non-coding upstream 59616 19148535 ~ 19148797 (+)
G119372 NA non-coding upstream 67746 19140187 ~ 19140667 (+)
G119392 NA non-coding downstream 17962 19227193 ~ 19252592 (+)
LOC110503718 LOC102193556 non-coding downstream 48424 19131905 ~ 19259074 (+)
G119411 NA non-coding downstream 58858 19268089 ~ 19268303 (+)
G119412 NA non-coding downstream 59292 19268523 ~ 19269489 (+)
G119413 NA non-coding downstream 61031 19270262 ~ 19271313 (+)
G119245 stl2 other upstream 246948 18934673 ~ 18992769 (+)
G119160 NA other upstream 536093 18670513 ~ 18672320 (+)
G119153 LOC106605761 other upstream 572372 18633839 ~ 18636041 (+)
LOC110536658 LOC106577300 other upstream 731279 18457284 ~ 18481741 (+)
G117735 NA other upstream 1750391 17455765 ~ 17458022 (+)
G119794 u2af2 other downstream 297420 19506651 ~ 19507338 (+)
LOC110537226 LOC106575133 other downstream 467504 19676656 ~ 19683059 (+)
G119952 nat14 other downstream 492868 19702099 ~ 19703788 (+)

Expression

G119398 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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G119398 Expression in each Bioproject

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G119398 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network