Item | Value |
---|---|
gene id | G119734 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 19220671 ~ 19247467 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU138145 | False | 8504 | lncRNA | 0.39 | 10 | 19220671 | 19247467 |
TU138148 | False | 4829 | lncRNA | 0.38 | 5 | 19221877 | 19239338 |
TU138149 | True | 4138 | lncRNA | 0.38 | 4 | 19226432 | 19239338 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110508916 | LOC106605783 | coding | downstream | 142718 | 19062094 ~ 19077953 (-) |
josd2 | josd2 | coding | downstream | 462875 | 18755291 ~ 18757796 (-) |
LOC110536927 | LOC106577129 | coding | downstream | 512040 | 18695833 ~ 18708631 (-) |
LOC110536908 | LOC106605765 | coding | downstream | 526851 | 18688948 ~ 18693820 (-) |
grwd1 | grwd1 | coding | downstream | 548261 | 18662604 ~ 18672410 (-) |
cacng6b | LOC106606119 | coding | upstream | 236861 | 19484328 ~ 19499142 (-) |
u2af2a | u2af2 | coding | upstream | 259201 | 19506668 ~ 19513981 (-) |
LOC110534365 | LOC106576897 | coding | upstream | 266812 | 19514279 ~ 19524832 (-) |
LOC110537080 | LOC106576890 | coding | upstream | 280528 | 19527995 ~ 19548154 (-) |
LOC110537104 | LOC106605828 | coding | upstream | 307451 | 19554918 ~ 19556242 (-) |
G119735 | NA | non-coding | downstream | 6566 | 19207479 ~ 19214105 (-) |
G119722 | NA | non-coding | downstream | 27587 | 19192860 ~ 19193084 (-) |
G119708 | LOC106591967 | non-coding | downstream | 76616 | 19143701 ~ 19144055 (-) |
G119644 | NA | non-coding | downstream | 81269 | 19139177 ~ 19139402 (-) |
G119705 | NA | non-coding | downstream | 84440 | 19135972 ~ 19136231 (-) |
G119740 | NA | non-coding | upstream | 10158 | 19257625 ~ 19258069 (-) |
G119741 | NA | non-coding | upstream | 12778 | 19260245 ~ 19262206 (-) |
G119742 | NA | non-coding | upstream | 15928 | 19263395 ~ 19267923 (-) |
G119744 | NA | non-coding | upstream | 20634 | 19268101 ~ 19268303 (-) |
G119747 | NA | non-coding | upstream | 25360 | 19272827 ~ 19280003 (-) |
G119663 | NA | other | downstream | 171641 | 19048307 ~ 19049030 (-) |
G119512 | LOC105019016 | other | downstream | 419284 | 18799500 ~ 18801387 (-) |
LOC110534340 | LOC106605761 | other | downstream | 574008 | 18627912 ~ 18646884 (-) |
LOC110536756 | ndufa3 | other | downstream | 678174 | 18541050 ~ 18543176 (-) |
G119087 | LOC106605728 | other | downstream | 743918 | 18476454 ~ 18476753 (-) |
LOC118944062 | LOC106575151 | other | upstream | 446222 | 19692971 ~ 19695564 (-) |
LOC110537275 | grl1 | other | upstream | 676631 | 19924063 ~ 19928533 (-) |
G121046 | NA | other | upstream | 963601 | 20211068 ~ 20212367 (-) |
LOC110509624 | ret1 | other | upstream | 1215215 | 20462682 ~ 20465854 (-) |