G119740


Basic Information

Item Value
gene id G119740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19257625 ~ 19258069 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138157
ccacccgttccctcgctctgtctctctgcctctcctcccccacatcttcctcatcatcctcctcagAGTCCCACTCATGGAAGGAGAGCCCCTCCTGTATGTTAGCCCTGCCTTTCTCATAGTGCATCAACAGaggcctcttctctccttctctccctccctcccttctctcgaCCCCTCCACTCCTCCGCCTCTTGGAGagtgagatgaggggagggagggaggaggggggtgttCCAGAGTTGGGGTCCCCCCCTTCCCCGTTTCCTCCGCTCACCCAAAACTTGACCGAGGCGGGGAGTTTGGGGTAGCGCTTACTGGGGGGTCGATGTCTGGAGTGGGAACGGGATGATTTGGGCCGCCTTTCCCTGCTCCTGctgctatcctcctctctatcacccccctcttcctcttctccctccctccttcctcgctccctctctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138157 True 445 lncRNA 0.47 1 19257625 19258069

Neighbor

gene id symbol gene type direction distance location
LOC110508916 LOC106605783 coding downstream 179672 19062094 ~ 19077953 (-)
josd2 josd2 coding downstream 499829 18755291 ~ 18757796 (-)
LOC110536927 LOC106577129 coding downstream 548994 18695833 ~ 18708631 (-)
LOC110536908 LOC106605765 coding downstream 563805 18688948 ~ 18693820 (-)
grwd1 grwd1 coding downstream 585215 18662604 ~ 18672410 (-)
cacng6b LOC106606119 coding upstream 226259 19484328 ~ 19499142 (-)
u2af2a u2af2 coding upstream 248599 19506668 ~ 19513981 (-)
LOC110534365 LOC106576897 coding upstream 256210 19514279 ~ 19524832 (-)
LOC110537080 LOC106576890 coding upstream 269926 19527995 ~ 19548154 (-)
LOC110537104 LOC106605828 coding upstream 296849 19554918 ~ 19556242 (-)
G119734 NA non-coding downstream 10158 19220671 ~ 19247467 (-)
G119735 NA non-coding downstream 43520 19207479 ~ 19214105 (-)
G119722 NA non-coding downstream 64541 19192860 ~ 19193084 (-)
G119708 LOC106591967 non-coding downstream 113570 19143701 ~ 19144055 (-)
G119644 NA non-coding downstream 118223 19139177 ~ 19139402 (-)
G119741 NA non-coding upstream 2176 19260245 ~ 19262206 (-)
G119742 NA non-coding upstream 5326 19263395 ~ 19267923 (-)
G119744 NA non-coding upstream 10032 19268101 ~ 19268303 (-)
G119747 NA non-coding upstream 14758 19272827 ~ 19280003 (-)
G119749 NA non-coding upstream 27555 19285624 ~ 19287713 (-)
G119663 NA other downstream 208595 19048307 ~ 19049030 (-)
G119512 LOC105019016 other downstream 456238 18799500 ~ 18801387 (-)
LOC110534340 LOC106605761 other downstream 610962 18627912 ~ 18646884 (-)
LOC110536756 ndufa3 other downstream 715128 18541050 ~ 18543176 (-)
G119087 LOC106605728 other downstream 780872 18476454 ~ 18476753 (-)
LOC118944062 LOC106575151 other upstream 435620 19692971 ~ 19695564 (-)
LOC110537275 grl1 other upstream 666029 19924063 ~ 19928533 (-)
G121046 NA other upstream 952999 20211068 ~ 20212367 (-)
LOC110509624 ret1 other upstream 1204613 20462682 ~ 20465854 (-)

Expression


Co-expression Network