Gene
RNA
| Item | Value |
|---|---|
| gene id | G119747 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 19272827 ~ 19280003 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU138168 | False | 249 | lncRNA | 0.49 | 2 | 19272827 | 19280003 |
| TU138169 | True | 249 | lncRNA | 0.50 | 2 | 19276355 | 19280003 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508916 | LOC106605783 | coding | downstream | 194874 | 19062094 ~ 19077953 (-) |
| josd2 | josd2 | coding | downstream | 515031 | 18755291 ~ 18757796 (-) |
| LOC110536927 | LOC106577129 | coding | downstream | 564196 | 18695833 ~ 18708631 (-) |
| LOC110536908 | LOC106605765 | coding | downstream | 579007 | 18688948 ~ 18693820 (-) |
| grwd1 | grwd1 | coding | downstream | 600417 | 18662604 ~ 18672410 (-) |
| cacng6b | LOC106606119 | coding | upstream | 204325 | 19484328 ~ 19499142 (-) |
| u2af2a | u2af2 | coding | upstream | 226665 | 19506668 ~ 19513981 (-) |
| LOC110534365 | LOC106576897 | coding | upstream | 234276 | 19514279 ~ 19524832 (-) |
| LOC110537080 | LOC106576890 | coding | upstream | 247992 | 19527995 ~ 19548154 (-) |
| LOC110537104 | LOC106605828 | coding | upstream | 274915 | 19554918 ~ 19556242 (-) |
| G119744 | NA | non-coding | downstream | 4524 | 19268101 ~ 19268303 (-) |
| G119742 | NA | non-coding | downstream | 4904 | 19263395 ~ 19267923 (-) |
| G119741 | NA | non-coding | downstream | 10621 | 19260245 ~ 19262206 (-) |
| G119740 | NA | non-coding | downstream | 14758 | 19257625 ~ 19258069 (-) |
| G119734 | NA | non-coding | downstream | 25360 | 19220671 ~ 19247467 (-) |
| G119749 | NA | non-coding | upstream | 5621 | 19285624 ~ 19287713 (-) |
| G119752 | NA | non-coding | upstream | 11611 | 19291614 ~ 19291862 (-) |
| G119758 | NA | non-coding | upstream | 23112 | 19303115 ~ 19303323 (-) |
| G119763 | NA | non-coding | upstream | 33088 | 19313091 ~ 19315241 (-) |
| G119764 | NA | non-coding | upstream | 35246 | 19315249 ~ 19320277 (-) |
| G119663 | NA | other | downstream | 223797 | 19048307 ~ 19049030 (-) |
| G119512 | LOC105019016 | other | downstream | 471440 | 18799500 ~ 18801387 (-) |
| LOC110534340 | LOC106605761 | other | downstream | 626164 | 18627912 ~ 18646884 (-) |
| LOC110536756 | ndufa3 | other | downstream | 730330 | 18541050 ~ 18543176 (-) |
| G119087 | LOC106605728 | other | downstream | 796074 | 18476454 ~ 18476753 (-) |
| LOC118944062 | LOC106575151 | other | upstream | 413686 | 19692971 ~ 19695564 (-) |
| LOC110537275 | grl1 | other | upstream | 644095 | 19924063 ~ 19928533 (-) |
| G121046 | NA | other | upstream | 931065 | 20211068 ~ 20212367 (-) |
| LOC110509624 | ret1 | other | upstream | 1182679 | 20462682 ~ 20465854 (-) |
