G119417


Basic Information

Item Value
gene id G119417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19288160 ~ 19288443 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137754
gggactcccaatcacggccggatgtgatgcagcctgaattcgaaccaggtactgcagtgacgcctcttgcactgagatgcagtgtcttagaacactgcgccactcaggagtggACCCTCATGATGAGATCAGATTTTTTTGCGGCCCCCTACCCCTATCAAAGTTGTCCATCCCTGGtgtagctgatcctagatctgtacctaagggCAATTTGTACCCCGTCCCTGAACTAGGAGTTTGAGTTTGAGCTTGACATACCCAACCCCAACTTACCACtatcccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137754 True 284 lncRNA 0.52 1 19288160 19288443

Neighbor

gene id symbol gene type direction distance location
LOC110503718 LOC102193556 coding upstream 29086 19131905 ~ 19259074 (+)
LOC110520830 LOC106605779 coding upstream 287950 18994838 ~ 19000210 (+)
LOC118938275 stl2 coding upstream 296793 18984795 ~ 18991367 (+)
stl2 stl2 coding upstream 310649 18971209 ~ 18977511 (+)
LOC110517769 stl2 coding upstream 326765 18956065 ~ 18961395 (+)
LOC110512786 LOC105019084 coding downstream 19133 19307576 ~ 19347300 (+)
LOC110534362 LOC106575226 coding downstream 104294 19392737 ~ 19433631 (+)
LOC110537022 LOC106576929 coding downstream 155688 19444131 ~ 19481383 (+)
LOC110537095 LOC106576906 coding downstream 237720 19526163 ~ 19528660 (+)
LOC110537107 LOC106605819 coding downstream 277436 19565879 ~ 19579511 (+)
G119415 NA non-coding upstream 1261 19276328 ~ 19286899 (+)
G119414 NA non-coding upstream 13365 19271405 ~ 19274795 (+)
G119413 NA non-coding upstream 16847 19270262 ~ 19271313 (+)
G119412 NA non-coding upstream 18671 19268523 ~ 19269489 (+)
G119411 NA non-coding upstream 19857 19268089 ~ 19268303 (+)
G119418 LOC106610265 non-coding downstream 756 19289199 ~ 19289470 (+)
G119419 NA non-coding downstream 2952 19291395 ~ 19291791 (+)
G119425 NA non-coding downstream 12293 19300736 ~ 19301057 (+)
G119428 NA non-coding downstream 15126 19303569 ~ 19303867 (+)
G119429 NA non-coding downstream 15978 19304421 ~ 19306922 (+)
G119245 stl2 other upstream 326695 18934673 ~ 18992769 (+)
G119160 NA other upstream 615840 18670513 ~ 18672320 (+)
G119153 LOC106605761 other upstream 652119 18633839 ~ 18636041 (+)
LOC110536658 LOC106577300 other upstream 811026 18457284 ~ 18481741 (+)
G119794 u2af2 other downstream 218208 19506651 ~ 19507338 (+)
LOC110537226 LOC106575133 other downstream 388292 19676656 ~ 19683059 (+)
G119952 nat14 other downstream 413656 19702099 ~ 19703788 (+)
LOC110537243 LOC106576860 other downstream 479827 19768270 ~ 19778335 (+)

Expression


Co-expression Network