G119428


Basic Information

Item Value
gene id G119428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19303569 ~ 19303867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU137765
ctccgTCCCTCTCCATCagcccttttctttctctctcatcacctCATCCCCTGCCTGTACAGTATATCTCTATCTcgaccactctctctcttttttctctatcATGCtgtccatccttctccctctctctgttcgaTGTCAGTGTTAACATGATGTATTTTTACTACTGTCTCATATGAGGTCGTAaaccttctgtgtgtgtgtgtctgcttgtatTCCATTAAAACCCTTTCTAACCATGTGAGGAGGGTCCCAATAACACCAGACGCCCCTCTCTGAGAAACTGCATTACCCATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137765 True 299 lncRNA 0.44 1 19303569 19303867

Neighbor

gene id symbol gene type direction distance location
LOC110503718 LOC102193556 coding upstream 44495 19131905 ~ 19259074 (+)
LOC110520830 LOC106605779 coding upstream 303359 18994838 ~ 19000210 (+)
LOC118938275 stl2 coding upstream 312202 18984795 ~ 18991367 (+)
stl2 stl2 coding upstream 326058 18971209 ~ 18977511 (+)
LOC110517769 stl2 coding upstream 342174 18956065 ~ 18961395 (+)
LOC110512786 LOC105019084 coding downstream 3709 19307576 ~ 19347300 (+)
LOC110534362 LOC106575226 coding downstream 88870 19392737 ~ 19433631 (+)
LOC110537022 LOC106576929 coding downstream 140264 19444131 ~ 19481383 (+)
LOC110537095 LOC106576906 coding downstream 222296 19526163 ~ 19528660 (+)
LOC110537107 LOC106605819 coding downstream 262012 19565879 ~ 19579511 (+)
G119425 NA non-coding upstream 2512 19300736 ~ 19301057 (+)
G119419 NA non-coding upstream 11778 19291395 ~ 19291791 (+)
G119418 LOC106610265 non-coding upstream 14099 19289199 ~ 19289470 (+)
G119417 NA non-coding upstream 15126 19288160 ~ 19288443 (+)
G119415 NA non-coding upstream 16670 19276328 ~ 19286899 (+)
G119429 NA non-coding downstream 554 19304421 ~ 19306922 (+)
G119434 NA non-coding downstream 22183 19326050 ~ 19329412 (+)
G119445 NA non-coding downstream 46341 19350208 ~ 19350416 (+)
G119785 NA non-coding downstream 48560 19352427 ~ 19352718 (+)
G119792 NA non-coding downstream 86580 19390447 ~ 19390752 (+)
G119245 stl2 other upstream 342104 18934673 ~ 18992769 (+)
G119160 NA other upstream 631249 18670513 ~ 18672320 (+)
G119153 LOC106605761 other upstream 667528 18633839 ~ 18636041 (+)
LOC110536658 LOC106577300 other upstream 826435 18457284 ~ 18481741 (+)
G119794 u2af2 other downstream 202784 19506651 ~ 19507338 (+)
LOC110537226 LOC106575133 other downstream 372868 19676656 ~ 19683059 (+)
G119952 nat14 other downstream 398232 19702099 ~ 19703788 (+)
LOC110537243 LOC106576860 other downstream 464403 19768270 ~ 19778335 (+)

Expression


Co-expression Network