G119808


Basic Information

Item Value
gene id G119808
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19399449 ~ 19404318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138244
cctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttcatgtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctGTCTCTCTTcttgtcactcctcctctcctctctgtctctcttcatgtcactccttatctcctctctgtctcccttctagtcactcctcctctcctctctgtctctcttgtagtcactcctcatcttctctctgtctctcttctagtcactcctcctctcctctctgtctctcttctagtcactcctcctctcctctctgtctctcttcatgtcactcctcatctcctctctgtctcccttcatgTCACTCCTCATCTCCTCTAGGTCTCTCTTcttgtcactcctcctctcctctctgtctccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138244 True 548 lncRNA 0.42 3 19399449 19404318

Neighbor

gene id symbol gene type direction distance location
LOC110512786 LOC105019084 coding upstream 52149 19307576 ~ 19347300 (+)
LOC110503718 LOC102193556 coding upstream 140375 19131905 ~ 19259074 (+)
LOC110520830 LOC106605779 coding upstream 399239 18994838 ~ 19000210 (+)
LOC118938275 stl2 coding upstream 408082 18984795 ~ 18991367 (+)
stl2 stl2 coding upstream 421938 18971209 ~ 18977511 (+)
LOC110537022 LOC106576929 coding downstream 39813 19444131 ~ 19481383 (+)
LOC110537095 LOC106576906 coding downstream 121845 19526163 ~ 19528660 (+)
LOC110537107 LOC106605819 coding downstream 161561 19565879 ~ 19579511 (+)
LOC110537165 LOC106605824 coding downstream 193195 19597513 ~ 19599416 (+)
LOC110537142 LOC106576877 coding downstream 233116 19637434 ~ 19645326 (+)
G119792 NA non-coding upstream 8697 19390447 ~ 19390752 (+)
G119785 NA non-coding upstream 46731 19352427 ~ 19352718 (+)
G119445 NA non-coding upstream 49033 19350208 ~ 19350416 (+)
G119434 NA non-coding upstream 70037 19326050 ~ 19329412 (+)
G119429 NA non-coding upstream 92527 19304421 ~ 19306922 (+)
G119814 NA non-coding downstream 3644 19407962 ~ 19409862 (+)
G119844 NA non-coding downstream 59010 19463328 ~ 19463916 (+)
G119855 NA non-coding downstream 88103 19492421 ~ 19492639 (+)
G119856 LOC106606119 non-coding downstream 88607 19492925 ~ 19494124 (+)
G119795 NA non-coding downstream 100548 19504866 ~ 19506500 (+)
G119245 stl2 other upstream 437984 18934673 ~ 18992769 (+)
G119160 NA other upstream 727129 18670513 ~ 18672320 (+)
G119153 LOC106605761 other upstream 763408 18633839 ~ 18636041 (+)
LOC110536658 LOC106577300 other upstream 922315 18457284 ~ 18481741 (+)
G119794 u2af2 other downstream 102333 19506651 ~ 19507338 (+)
LOC110537226 LOC106575133 other downstream 272417 19676656 ~ 19683059 (+)
G119952 nat14 other downstream 297781 19702099 ~ 19703788 (+)
LOC110537243 LOC106576860 other downstream 363952 19768270 ~ 19778335 (+)

Expression


Co-expression Network