XLOC_020990


Basic Information

Item Value
gene id XLOC_020990
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 13606281 ~ 13607563 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041944
TTAACTAAAGAACTCTAAACACAACATGATTTTATTCCACAGGTCTTCTCTAGGGGAAAGTGGAAACCATACCAGAATGGAACTATACTTGGAGTTCACCCTTGAAAGCATCTTCACATTTTCTGAAGATGTGGCTTCACCTTTGCTGGAACTGAAGGTgccttttttttgtctgtttctcTCCTTTCTTTCTATTCCcgtcttttatctttttttcctcTCACTCAGCCTTTCTTCCCAAAGCTTTGCTCCTAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041944 True 255 lncRNA 0.40 2 13606281 13607563

Neighbor

gene id symbol gene type direction distance location
XLOC_020989 cntnap5b coding downstream 62037 13458735 ~ 13544244 (-)
XLOC_020988 CU062647.1 coding downstream 174977 13422568 ~ 13431304 (-)
XLOC_020987 si:ch211-227m13.1 coding downstream 255925 13276693 ~ 13350356 (-)
XLOC_020986 NA coding downstream 361730 13201478 ~ 13244551 (-)
XLOC_020985 NA coding downstream 417949 13187861 ~ 13188332 (-)
XLOC_020991 si:ch211-279g13.1 coding upstream 31023 13638586 ~ 13649604 (-)
XLOC_020992 NA coding upstream 61422 13668985 ~ 13693627 (-)
XLOC_020993 CT990618.1 coding upstream 103871 13711434 ~ 13716585 (-)
XLOC_020994 s100b coding upstream 238567 13846130 ~ 13857729 (-)
XLOC_020995 BX649510.1 coding upstream 338390 13945953 ~ 13946067 (-)
XLOC_020984 BX908726.1 non-coding downstream 493959 13101736 ~ 13112322 (-)
XLOC_020981 NA non-coding downstream 641404 12958222 ~ 12964877 (-)
XLOC_020996 BX649296.1 non-coding upstream 412041 14019604 ~ 14019722 (-)
XLOC_021001 NA non-coding upstream 668183 14275746 ~ 14298602 (-)

Expression


Co-expression Network