XLOC_020991 (si:ch211-279g13.1)


Basic Information

Item Value
gene id XLOC_020991
gene name si:ch211-279g13.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 13638586 ~ 13649604 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041279
CGGACCCCGCAGACTCTGCTCCAGTTGAACACCCTCCTCGAGGCGACCCGCTTGAAAGATGATTACAAAAACTGTGTCAACTTGCTTCATTTTGTAAACAAGTGGCGACATGAACTGAAGTGTTGCAGCCCTGTGACGCTATATAGGACACTTTGGGACTTGGCTGTCTACATCAACATGGTGTAAACAAACAAGAATGGGTCCACCACACTGAGACGATCAGGATGGCTTTTACAGTGCTAAATTGAGAGGAAAACTGGAACTGCTAGCAACCGAGAAAAGGTCTGGTCTGGTTTTTGTTTGGTCATTTTGGCTGATATGAATTTTCTCAGCGTGAGGATACTCAGGCTCTCATTGTCAGAGACAGAGCAATCAGAAAAGAAGACGGACCCACTGAGAACTGCAGGAATTTCCAAACCAGCGCAGAGCCCGGGGGACCAGAGGAATCTACCACGGCGAACTGCGCGCTCACTCAGGTCGCCAGAGGAGCTGCAAAGGAGCAGACGTGACTCCGTGGTTTTCACTTTATTAACCTGT
>TCONS_00042360
ACATCATTCACGAGGACGGACCCCGCAGACTCTGCTCCAGTTGAACACCCTCCTCGAGGCGACCCGCTTGAAAGATGATTACAAAAACTGTGTCAACTTGCTTCATTTTGTAAACAAGTGGCGACATGAACTGAAGTGTTGCAGCCCTGTGACGCTATATAGGACACTTTGGGACTTGGCTGTCTACATCAACATGGTGTAAACAAACAAGAATGGGTCCACCACACTGAGACGATCAGGATGGCTTTTACAGTGCTAAATTGAGAGGAAAACTGGAACTGCTAGCAACCGAGAAAAGGAATTTCCAAACCAGCGCAGAGCCCGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093992

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041279 False 537 mRNA 0.49 4 13638586 13649588
TCONS_00042360 True 325 lncRNA 0.48 3 13638850 13649604

Neighbor

gene id symbol gene type direction distance location
XLOC_020990 NA coding downstream 31023 13606281 ~ 13607563 (-)
XLOC_020989 cntnap5b coding downstream 94342 13458735 ~ 13544244 (-)
XLOC_020988 CU062647.1 coding downstream 207282 13422568 ~ 13431304 (-)
XLOC_020987 si:ch211-227m13.1 coding downstream 288230 13276693 ~ 13350356 (-)
XLOC_020986 NA coding downstream 394035 13201478 ~ 13244551 (-)
XLOC_020992 NA coding upstream 19381 13668985 ~ 13693627 (-)
XLOC_020993 CT990618.1 coding upstream 61830 13711434 ~ 13716585 (-)
XLOC_020994 s100b coding upstream 196526 13846130 ~ 13857729 (-)
XLOC_020995 BX649510.1 coding upstream 296349 13945953 ~ 13946067 (-)
XLOC_020996 BX649296.1 coding upstream 370000 14019604 ~ 14019722 (-)
XLOC_020985 NA non-coding downstream 450254 13187861 ~ 13188332 (-)
XLOC_020984 BX908726.1 non-coding downstream 526264 13101736 ~ 13112322 (-)
XLOC_021001 NA non-coding upstream 626142 14275746 ~ 14298602 (-)

Expression


Co-expression Network