G119866


Basic Information

Item Value
gene id G119866
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19518941 ~ 19519677 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138313
ctatcttgaaggaaaatgttgtagttgggaatgaaaatgtctgaatttttggtggaaCATGAAATGAGTAACATGGCTGCCATTGTCCCtcacctctctgcctctccctggtGATTCGGAAGACCCGCCTCCTCTTCATCCCTGGGTGCCCACCGCCGCTCATGCCCTCGGACATCACGTCCTCTCCTGAAATCATTTCCTCCTCGTTCATGTAGCCATCCTGCTCCAGGAACTCCTCGGCCTCCCCCAGGAGGGACAGGGAATCTGAAGAGACAAACAAGACCGTGATAAAAAACAACTTTAGACTAGAGGCGCTAGACTAGAGGTGATAGACTAGAGGTGATAGACGAGAGATGCTCATAGTTTGGATTAAAGATTGTCATGTAAGTGAACATTTATTCCTGCCCCATCTGGTACTGTCCATTTTTCCCCTGTACTGTCC
>TU138314
ctatcttgaaggaaaatgttgtagttgggaatgaaaatgtctgaatttttggtggaaCATGAAATGAGTAACATGGCTGCCATTGTCCCtcacctctctgcctctccctggtGATTCGGAAGACCCGCCTCCTCTTCATCCCTGGGTGCCCACCGCCGCTCATGCCCTCGGACATCACGTCCTCTCCTGAAATCATTTCCTCCTCGTTCATGTAGCCATCCTGCTCCAGGAACTCCTCGGCCTCCCCCAGGAGGGACAGGGAATCTGAAGAGACAAACAAGACCGTGATAAAAAACAACTTTAGACTAGAGGCGCTAGACTAGAGGTGATAGACTAGAGGTGCTAGACTAGAGGTGATAGACGAGAGGTGATAG

Function

NR:

description
coiled-coil domain-containing protein 106-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138313 False 442 lncRNA 0.48 3 19518941 19519677
TU138314 True 374 lncRNA 0.50 3 19518941 19519497
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110537022 LOC106576929 coding upstream 37558 19444131 ~ 19481383 (+)
LOC110534362 LOC106575226 coding upstream 85310 19392737 ~ 19433631 (+)
LOC110512786 LOC105019084 coding upstream 171641 19307576 ~ 19347300 (+)
LOC110503718 LOC102193556 coding upstream 259867 19131905 ~ 19259074 (+)
LOC110520830 LOC106605779 coding upstream 518731 18994838 ~ 19000210 (+)
LOC110537095 LOC106576906 coding downstream 6486 19526163 ~ 19528660 (+)
LOC110537107 LOC106605819 coding downstream 46202 19565879 ~ 19579511 (+)
LOC110537165 LOC106605824 coding downstream 77836 19597513 ~ 19599416 (+)
LOC110537142 LOC106576877 coding downstream 117757 19637434 ~ 19645326 (+)
LOC110537226 LOC106575133 coding downstream 156979 19676656 ~ 19683059 (+)
G119795 NA non-coding upstream 12441 19504866 ~ 19506500 (+)
G119856 LOC106606119 non-coding upstream 24817 19492925 ~ 19494124 (+)
G119855 NA non-coding upstream 26302 19492421 ~ 19492639 (+)
G119844 NA non-coding upstream 55025 19463328 ~ 19463916 (+)
G119814 NA non-coding upstream 109079 19407962 ~ 19409862 (+)
G119883 NA non-coding downstream 33038 19552715 ~ 19562850 (+)
G119909 NA non-coding downstream 61144 19580821 ~ 19582374 (+)
G119916 LOC106605822 non-coding downstream 71865 19591542 ~ 19595167 (+)
G119899 NA non-coding downstream 141230 19660907 ~ 19750224 (+)
G119893 NA non-coding downstream 164116 19683793 ~ 19685529 (+)
G119794 u2af2 other upstream 11603 19506651 ~ 19507338 (+)
G119245 stl2 other upstream 557476 18934673 ~ 18992769 (+)
G119160 NA other upstream 846621 18670513 ~ 18672320 (+)
G119153 LOC106605761 other upstream 882900 18633839 ~ 18636041 (+)
G119952 nat14 other downstream 182422 19702099 ~ 19703788 (+)
LOC110537243 LOC106576860 other downstream 248593 19768270 ~ 19778335 (+)
G120059 grl1 other downstream 404395 19924072 ~ 19928477 (+)

Expression

G119866 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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G119866 Expression in each Bioproject

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G119866 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network