G119909


Basic Information

Item Value
gene id G119909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19580821 ~ 19582374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138367
CTACAGTAGAGGTACCACAGAGCAATACAGAGATATCTACAGTAGAGGTAccacagacagatagagaaatACAGAGATATCTACAGTAGAGCTACCACAGAGAGATCGAGAAATACGGAGATATCTACAGTAGAGGTACCacagacagagaaatacagagatatCTACAGTAAAGCTACCacagacagagaaatacagagaggtCTACAGGAAAGCTACCACAgatagagaaatacagagaaatcTACAGTAGAGGTAccacagacagatagagaaatacagagagatctaCAGTAGAGGTAccacagacagatagagaaatACAGAGATATCTACAGTAGAGGTAccacagacagatagagaaatACAGAGATATCTACAGCATAGCTACCCATCGAGGGATAGAGAAATCTACAGTAGAGGTaccacagagagatagagaaatacaGAGATATCTACAGTAGAGCTAccacagacagatagagaaatacagagagatctaCAGCATAGCTACCCAACGAGGgatagagaaatacagagagatctaCAGTAGAGGTaccacagacagagacatacagagagatctacagtagagataccacagacagatagagaaatGCAGAGAGATCTACAGCATAGCTACCCATCGAGAgatagagacatacagagagatctACAGTAGAGGTAccacagacagatagagaaatACAGAGATATCTACAGTAGAGgtaacacagagagataaagaaataCAGAGATATCTGCAGTAGAGGTTgccacagagagatggagaaatacAGAGATATCTACAGTAGAGGTACCACAGACAGAGCAATACAGAGAGGTCTACAGTAAAGCTaccacagagagatagagaaatacaGAGATATCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138367 True 894 lncRNA 0.41 3 19580821 19582374

Neighbor

gene id symbol gene type direction distance location
LOC110537107 LOC106605819 coding upstream 1310 19565879 ~ 19579511 (+)
LOC110537095 LOC106576906 coding upstream 52902 19526163 ~ 19528660 (+)
LOC110537022 LOC106576929 coding upstream 99438 19444131 ~ 19481383 (+)
LOC110534362 LOC106575226 coding upstream 147190 19392737 ~ 19433631 (+)
LOC110512786 LOC105019084 coding upstream 233521 19307576 ~ 19347300 (+)
LOC110537165 LOC106605824 coding downstream 15139 19597513 ~ 19599416 (+)
LOC110537142 LOC106576877 coding downstream 55060 19637434 ~ 19645326 (+)
LOC110537226 LOC106575133 coding downstream 94282 19676656 ~ 19683059 (+)
LOC118944064 NA coding downstream 116117 19698491 ~ 19699519 (+)
LOC110537243 LOC106576860 coding downstream 193055 19768270 ~ 19778335 (+)
G119883 NA non-coding upstream 17971 19552715 ~ 19562850 (+)
G119866 NA non-coding upstream 61144 19518941 ~ 19519677 (+)
G119795 NA non-coding upstream 74321 19504866 ~ 19506500 (+)
G119856 LOC106606119 non-coding upstream 86697 19492925 ~ 19494124 (+)
G119855 NA non-coding upstream 88182 19492421 ~ 19492639 (+)
G119916 LOC106605822 non-coding downstream 9168 19591542 ~ 19595167 (+)
G119899 NA non-coding downstream 78533 19660907 ~ 19750224 (+)
G119893 NA non-coding downstream 101419 19683793 ~ 19685529 (+)
G119955 LOC106605829 non-coding downstream 128108 19710482 ~ 19713435 (+)
G119986 NA non-coding downstream 176084 19758458 ~ 19758725 (+)
G119794 u2af2 other upstream 73483 19506651 ~ 19507338 (+)
LOC110503718 LOC102193556 other upstream 323327 19131905 ~ 19259074 (+)
G119245 stl2 other upstream 619356 18934673 ~ 18992769 (+)
G119160 NA other upstream 908501 18670513 ~ 18672320 (+)
G119952 nat14 other downstream 119725 19702099 ~ 19703788 (+)
G120059 grl1 other downstream 341698 19924072 ~ 19928477 (+)
casp2 LOC106605831 other downstream 436325 20018602 ~ 20030933 (+)

Expression


Co-expression Network