G119899


Basic Information

Item Value
gene id G119899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19660907 ~ 19750224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138354
gtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaggggggctgagtggagaggatccgaagtcgctgggtccattcttggtcggattcttctgtcaggagcgtgaatgaggacccaaaagcgaattaacaaacagagtttctttaatgatgaacacacgtgggctcagatggacaggtagattccgacaggacaggacaaggttgcagcaaacacgatgatagtctggttcaggcatgagacacacaaacaagaatccgacaaagacaggagcagaaacagagag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138354 True 576 lncRNA 0.45 3 19660907 19750224

Neighbor

gene id symbol gene type direction distance location
LOC110537142 LOC106576877 coding upstream 15581 19637434 ~ 19645326 (+)
LOC110537165 LOC106605824 coding upstream 61491 19597513 ~ 19599416 (+)
LOC110537107 LOC106605819 coding upstream 81396 19565879 ~ 19579511 (+)
LOC110537095 LOC106576906 coding upstream 132988 19526163 ~ 19528660 (+)
LOC110537022 LOC106576929 coding upstream 179524 19444131 ~ 19481383 (+)
LOC110537243 LOC106576860 coding downstream 25205 19768270 ~ 19778335 (+)
LOC110537251 LOC106605841 coding downstream 46170 19796394 ~ 19828604 (+)
LOC110537257 LOC106576842 coding downstream 83165 19833389 ~ 19892698 (+)
ecac ecac coding downstream 148095 19898319 ~ 19910352 (+)
LOC110537283 mprd coding downstream 195866 19946090 ~ 19953207 (+)
G119916 LOC106605822 non-coding upstream 65740 19591542 ~ 19595167 (+)
G119909 NA non-coding upstream 78533 19580821 ~ 19582374 (+)
G119883 NA non-coding upstream 98057 19552715 ~ 19562850 (+)
G119866 NA non-coding upstream 141230 19518941 ~ 19519677 (+)
G119795 NA non-coding upstream 154407 19504866 ~ 19506500 (+)
G119986 NA non-coding downstream 8234 19758458 ~ 19758725 (+)
G120018 NA non-coding downstream 69748 19819972 ~ 19821386 (+)
G120031 NA non-coding downstream 99275 19849499 ~ 19850437 (+)
G120032 NA non-coding downstream 99512 19849736 ~ 19850902 (+)
G120048 NA non-coding downstream 129742 19879966 ~ 19881716 (+)
G119794 u2af2 other upstream 153569 19506651 ~ 19507338 (+)
LOC110503718 LOC102193556 other upstream 403413 19131905 ~ 19259074 (+)
G119245 stl2 other upstream 699442 18934673 ~ 18992769 (+)
G119160 NA other upstream 988587 18670513 ~ 18672320 (+)
G120059 grl1 other downstream 173848 19924072 ~ 19928477 (+)
casp2 LOC106605831 other downstream 268475 20018602 ~ 20030933 (+)
zyx zyx other downstream 395509 20145710 ~ 20165887 (+)
G120211 NA other downstream 420858 20171082 ~ 20171381 (+)

Expression


Co-expression Network