G119986


Basic Information

Item Value
gene id G119986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19758458 ~ 19758725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138462
gtgtgagagagtatgagagagaaagagtaagagagagagaaaaggagaaagagaagatagtTCTCCCTGTATGTTTATTTACATCCATAAGACAGAATGTATGCACATATCAATGCGGCTGAATGTGTAGCTACTGgtgtgatgtatgtgtgtgtgtgttggtatgcaTATctgaatgtgtgagtgtgtcacaCACAGACTAATGGCATGACACACATTCAAACtcagacagggatcagagaggTTAACTGTAGAGCATATAAACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138462 True 268 lncRNA 0.41 1 19758458 19758725

Neighbor

gene id symbol gene type direction distance location
LOC118944064 NA coding upstream 58939 19698491 ~ 19699519 (+)
LOC110537226 LOC106575133 coding upstream 75399 19676656 ~ 19683059 (+)
LOC110537142 LOC106576877 coding upstream 113132 19637434 ~ 19645326 (+)
LOC110537165 LOC106605824 coding upstream 159042 19597513 ~ 19599416 (+)
LOC110537107 LOC106605819 coding upstream 178947 19565879 ~ 19579511 (+)
LOC110537243 LOC106576860 coding downstream 16704 19768270 ~ 19778335 (+)
LOC110537251 LOC106605841 coding downstream 37669 19796394 ~ 19828604 (+)
LOC110537257 LOC106576842 coding downstream 74664 19833389 ~ 19892698 (+)
ecac ecac coding downstream 139594 19898319 ~ 19910352 (+)
LOC110537283 mprd coding downstream 187365 19946090 ~ 19953207 (+)
G119899 NA non-coding upstream 8234 19660907 ~ 19750224 (+)
G119955 LOC106605829 non-coding upstream 45023 19710482 ~ 19713435 (+)
G119893 NA non-coding upstream 72929 19683793 ~ 19685529 (+)
G119916 LOC106605822 non-coding upstream 163291 19591542 ~ 19595167 (+)
G119909 NA non-coding upstream 176084 19580821 ~ 19582374 (+)
G120018 NA non-coding downstream 61247 19819972 ~ 19821386 (+)
G120031 NA non-coding downstream 90774 19849499 ~ 19850437 (+)
G120032 NA non-coding downstream 91011 19849736 ~ 19850902 (+)
G120048 NA non-coding downstream 121241 19879966 ~ 19881716 (+)
G120059 grl1 non-coding downstream 165347 19924072 ~ 19928477 (+)
G119952 nat14 other upstream 54670 19702099 ~ 19703788 (+)
LOC110537095 LOC106576906 other upstream 229798 19526163 ~ 19528660 (+)
G119794 u2af2 other upstream 251120 19506651 ~ 19507338 (+)
LOC110503718 LOC102193556 other upstream 500964 19131905 ~ 19259074 (+)
casp2 LOC106605831 other downstream 259974 20018602 ~ 20030933 (+)
zyx zyx other downstream 387008 20145710 ~ 20165887 (+)
G120211 NA other downstream 412357 20171082 ~ 20171381 (+)

Expression


Co-expression Network