Gene
RNA
| Item | Value |
|---|---|
| gene id | G120031 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 19849499 ~ 19850437 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU138511 | True | 205 | lncRNA | 0.47 | 2 | 19849499 | 19850437 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537251 | LOC106605841 | coding | upstream | 20895 | 19796394 ~ 19828604 (+) |
| LOC110537243 | LOC106576860 | coding | upstream | 71168 | 19768270 ~ 19778335 (+) |
| LOC118944064 | NA | coding | upstream | 149980 | 19698491 ~ 19699519 (+) |
| LOC110537226 | LOC106575133 | coding | upstream | 166440 | 19676656 ~ 19683059 (+) |
| LOC110537142 | LOC106576877 | coding | upstream | 204173 | 19637434 ~ 19645326 (+) |
| ecac | ecac | coding | downstream | 47882 | 19898319 ~ 19910352 (+) |
| LOC110537283 | mprd | coding | downstream | 95653 | 19946090 ~ 19953207 (+) |
| LOC110537299 | LOC106605834 | coding | downstream | 113477 | 19963914 ~ 19971980 (+) |
| casp2 | LOC106605831 | coding | downstream | 168165 | 20018602 ~ 20030933 (+) |
| LOC110534391 | clcn1 | coding | downstream | 181454 | 20031891 ~ 20093717 (+) |
| G120018 | NA | non-coding | upstream | 28113 | 19819972 ~ 19821386 (+) |
| G119986 | NA | non-coding | upstream | 90774 | 19758458 ~ 19758725 (+) |
| G119899 | NA | non-coding | upstream | 99275 | 19660907 ~ 19750224 (+) |
| G119955 | LOC106605829 | non-coding | upstream | 136064 | 19710482 ~ 19713435 (+) |
| G119893 | NA | non-coding | upstream | 163970 | 19683793 ~ 19685529 (+) |
| G120048 | NA | non-coding | downstream | 29529 | 19879966 ~ 19881716 (+) |
| G120059 | grl1 | non-coding | downstream | 73635 | 19924072 ~ 19928477 (+) |
| G120079 | NA | non-coding | downstream | 107257 | 19957694 ~ 19957965 (+) |
| G120085 | NA | non-coding | downstream | 110537 | 19960974 ~ 19961182 (+) |
| G120082 | NA | non-coding | downstream | 136966 | 19987403 ~ 19990796 (+) |
| G119952 | nat14 | other | upstream | 145711 | 19702099 ~ 19703788 (+) |
| LOC110537095 | LOC106576906 | other | upstream | 320839 | 19526163 ~ 19528660 (+) |
| G119794 | u2af2 | other | upstream | 342161 | 19506651 ~ 19507338 (+) |
| zyx | zyx | other | downstream | 295296 | 20145710 ~ 20165887 (+) |
| G120211 | NA | other | downstream | 320645 | 20171082 ~ 20171381 (+) |
| LOC110537348 | LOC106575899 | other | downstream | 328971 | 20179254 ~ 20185414 (+) |
