G120048


Basic Information

Item Value
gene id G120048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19879966 ~ 19881716 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138531
ctacaagatgttgaaagcgttccacagggatgctggcccatgttgactctaatgcttcccacagttgtaatGTTGGCTGGATAttattgggtggtggaccattgttggtacacacgggaaactgttaaagtgtggaaaaacccagcagcgttgcagttcttgaaaatgtcttgcccattcaccctctgaatggtacacatacacaatccatgcatcaattgtctcaaggcttaaaaatctttctttacactgattgaaggggatttattaacaagtgacatcagtgatgtgttgtgttggatttgccccaaacataacactttgtattcaggacataaagttgtTTTTTATTGcactattactttagtgccttgttacaaacaggatgcgtgttttacagtattattttagtgccttgttacaaacaggatgcatgttttacagtattactttagtgcgttgttacaaacaggatgcatgttttacagtattactttagtgccttatagcaaacaggatgcgtgttttacagtattactttagtgccttgttacaaacagAATGCgtgttttacagtattactttaatgccttatagcaaacaggatgcgtgttttacagtattactttagtgcgttgttacaaacaggatgtgtgttttacagtattactttagtgccttatagcaaacaggATGCgtgttttacagtattactttagtgccttataccaaacaggatgcatgttttacagtattactttagtgccttataccaaacaggatgcatgttttacagtattactttagtgccttgttacaaacagAATGCgtgttttacagtattactttagtgccttatagcaaacaggatgcatgttttacagtattactttagtgccttgttacaaacaggatgcatgttttacagtattactttagtgccttgttacaaacaggatgcgtgttttacagtattactttagtgccttgttacaaacaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138531 True 1003 lncRNA 0.49 4 19879966 19881716

Neighbor

gene id symbol gene type direction distance location
LOC110537251 LOC106605841 coding upstream 51362 19796394 ~ 19828604 (+)
LOC110537243 LOC106576860 coding upstream 101635 19768270 ~ 19778335 (+)
LOC118944064 NA coding upstream 180447 19698491 ~ 19699519 (+)
LOC110537226 LOC106575133 coding upstream 196907 19676656 ~ 19683059 (+)
LOC110537142 LOC106576877 coding upstream 234640 19637434 ~ 19645326 (+)
ecac ecac coding downstream 16603 19898319 ~ 19910352 (+)
LOC110537283 mprd coding downstream 64374 19946090 ~ 19953207 (+)
LOC110537299 LOC106605834 coding downstream 82198 19963914 ~ 19971980 (+)
casp2 LOC106605831 coding downstream 136886 20018602 ~ 20030933 (+)
LOC110534391 clcn1 coding downstream 150175 20031891 ~ 20093717 (+)
G120032 NA non-coding upstream 29064 19849736 ~ 19850902 (+)
G120031 NA non-coding upstream 29529 19849499 ~ 19850437 (+)
G120018 NA non-coding upstream 58580 19819972 ~ 19821386 (+)
G119986 NA non-coding upstream 121241 19758458 ~ 19758725 (+)
G119899 NA non-coding upstream 129742 19660907 ~ 19750224 (+)
G120059 grl1 non-coding downstream 42356 19924072 ~ 19928477 (+)
G120079 NA non-coding downstream 75978 19957694 ~ 19957965 (+)
G120085 NA non-coding downstream 79258 19960974 ~ 19961182 (+)
G120082 NA non-coding downstream 105687 19987403 ~ 19990796 (+)
G119952 nat14 other upstream 176178 19702099 ~ 19703788 (+)
LOC110537095 LOC106576906 other upstream 351306 19526163 ~ 19528660 (+)
G119794 u2af2 other upstream 372628 19506651 ~ 19507338 (+)
zyx zyx other downstream 264017 20145710 ~ 20165887 (+)
G120211 NA other downstream 289366 20171082 ~ 20171381 (+)
LOC110537348 LOC106575899 other downstream 297692 20179254 ~ 20185414 (+)

Expression


Co-expression Network