G120079


Basic Information

Item Value
gene id G120079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19957694 ~ 19957965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138567
atccacattattgTATAAGAGAGGATTTGacaggtgtaagcaatatggtgaAATGTATTCAGAGACTATCAGAGGGCAATGTGGAGCTATTGCCATATTACTAACACCTGTCATTGTCTTAGAGCTCCACAAGTGCATGGGTTGTAGGGTCTAGGAGTCCATTTTGGATTGGCCTActgtttttataaaaaaaaaaaaaaaagtattaacaataaatcaatacaggaagtacatgtgggaacaagtgtatatatatatacacaatatacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138567 True 272 lncRNA 0.35 1 19957694 19957965

Neighbor

gene id symbol gene type direction distance location
LOC110537283 mprd coding upstream 4487 19946090 ~ 19953207 (+)
ecac ecac coding upstream 47342 19898319 ~ 19910352 (+)
LOC110537257 LOC106576842 coding upstream 64996 19833389 ~ 19892698 (+)
LOC110537251 LOC106605841 coding upstream 129090 19796394 ~ 19828604 (+)
LOC110537243 LOC106576860 coding upstream 179363 19768270 ~ 19778335 (+)
LOC110537299 LOC106605834 coding downstream 5949 19963914 ~ 19971980 (+)
casp2 LOC106605831 coding downstream 60637 20018602 ~ 20030933 (+)
LOC110534391 clcn1 coding downstream 73926 20031891 ~ 20093717 (+)
zyx zyx coding downstream 187745 20145710 ~ 20165887 (+)
LOC110537348 LOC106575899 coding downstream 221289 20179254 ~ 20185414 (+)
G120059 grl1 non-coding upstream 33090 19924072 ~ 19928477 (+)
G120048 NA non-coding upstream 75978 19879966 ~ 19881716 (+)
G120032 NA non-coding upstream 106792 19849736 ~ 19850902 (+)
G120031 NA non-coding upstream 107257 19849499 ~ 19850437 (+)
G120018 NA non-coding upstream 136308 19819972 ~ 19821386 (+)
G120085 NA non-coding downstream 3009 19960974 ~ 19961182 (+)
G120082 NA non-coding downstream 29438 19987403 ~ 19990796 (+)
G120126 NA non-coding downstream 94704 20052669 ~ 20053169 (+)
G120191 NA non-coding downstream 162947 20120912 ~ 20126334 (+)
G119952 nat14 other upstream 253906 19702099 ~ 19703788 (+)
LOC110537226 LOC106575133 other upstream 274635 19676656 ~ 19683059 (+)
LOC110537095 LOC106576906 other upstream 429034 19526163 ~ 19528660 (+)
G120211 NA other downstream 213117 20171082 ~ 20171381 (+)
G120259 NA other downstream 361774 20319739 ~ 20320256 (+)

Expression


Co-expression Network