G120085


Basic Information

Item Value
gene id G120085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 19960974 ~ 19961182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU138576
gggctggtgccatgtaccccggcccgaggagacacactggagaccagatgcgctgagccggcttcatggcacctggctcgatgcccactctagcccggccgatacgaggtgcTGCTACGTACCGCACCGGGttatgcctgcgcaccggggacaccgtgcgcctcacggcataacacggtgcctgcctggtccctctctccacggtaagc

Function

NR:

description
PREDICTED: extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138576 True 209 lncRNA 0.67 1 19960974 19961182

Neighbor

gene id symbol gene type direction distance location
LOC110537283 mprd coding upstream 7767 19946090 ~ 19953207 (+)
ecac ecac coding upstream 50622 19898319 ~ 19910352 (+)
LOC110537257 LOC106576842 coding upstream 68276 19833389 ~ 19892698 (+)
LOC110537251 LOC106605841 coding upstream 132370 19796394 ~ 19828604 (+)
LOC110537243 LOC106576860 coding upstream 182643 19768270 ~ 19778335 (+)
LOC110537299 LOC106605834 coding downstream 2732 19963914 ~ 19971980 (+)
casp2 LOC106605831 coding downstream 57420 20018602 ~ 20030933 (+)
LOC110534391 clcn1 coding downstream 70709 20031891 ~ 20093717 (+)
zyx zyx coding downstream 184528 20145710 ~ 20165887 (+)
LOC110537348 LOC106575899 coding downstream 218072 20179254 ~ 20185414 (+)
G120079 NA non-coding upstream 3009 19957694 ~ 19957965 (+)
G120059 grl1 non-coding upstream 36370 19924072 ~ 19928477 (+)
G120048 NA non-coding upstream 79258 19879966 ~ 19881716 (+)
G120032 NA non-coding upstream 110072 19849736 ~ 19850902 (+)
G120031 NA non-coding upstream 110537 19849499 ~ 19850437 (+)
G120082 NA non-coding downstream 26221 19987403 ~ 19990796 (+)
G120126 NA non-coding downstream 91487 20052669 ~ 20053169 (+)
G120191 NA non-coding downstream 159730 20120912 ~ 20126334 (+)
G120195 NA non-coding downstream 172592 20133774 ~ 20133976 (+)
G119952 nat14 other upstream 257186 19702099 ~ 19703788 (+)
LOC110537226 LOC106575133 other upstream 277915 19676656 ~ 19683059 (+)
LOC110537095 LOC106576906 other upstream 432314 19526163 ~ 19528660 (+)
G120211 NA other downstream 209900 20171082 ~ 20171381 (+)
G120259 NA other downstream 358557 20319739 ~ 20320256 (+)

Expression


Co-expression Network